FastQCFastQC Report
Sat 25 May 2024
HVN2MDMXY_n01_WGS_D_verna_252.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVN2MDMXY_n01_WGS_D_verna_252.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4
Sequences flagged as poor quality0
Sequence length151
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATAGAACCTAAGAGCTTCAGCAATCACACCGTTGTTCATCCTTCCACT125.0No Hit
TTTCCATATATTTTAAATTTAAAACCGAATGTATTATTAAAAAATGTTTC125.0No Hit
GAAGAGACTACATACTCGCACCAAAAGCAACGGTTCAAGGAGTGAGGAAA125.0No Hit
GATACAGTCGCTAAGGGAAAAGTCGGAAATATGGATGCGAGAAAACTCGG125.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)