Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HVMH3DRX2_n01_DayFour1 HVMH3DRX2_n01_DayFour1.fastq.gz Conventional base calls Sanger / Illumina 1.9 68807029.0 0.0 28.0 50.0 23.70429845308545 28.0 pass pass pass pass pass pass pass pass fail pass pass HVMH3DRX2_n01_DayFour2 HVMH3DRX2_n01_DayFour2.fastq.gz Conventional base calls Sanger / Illumina 1.9 44657140.0 0.0 28.0 50.0 17.39797799168417 28.0 pass pass pass pass pass pass pass pass fail pass pass HVMH3DRX2_n01_DayZero1 HVMH3DRX2_n01_DayZero1.fastq.gz Conventional base calls Sanger / Illumina 1.9 63826328.0 0.0 28.0 50.0 19.062708600586415 28.0 pass pass pass pass pass pass pass pass fail pass pass HVMH3DRX2_n01_DayZero2 HVMH3DRX2_n01_DayZero2.fastq.gz Conventional base calls Sanger / Illumina 1.9 53546713.0 0.0 28.0 50.0 22.66665702741514 28.0 pass pass pass pass pass pass pass pass fail pass pass HVMH3DRX2_n01_undetermined HVMH3DRX2_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 796251181.0 0.0 28.0 50.0 9.89156840329271 28.0 pass pass pass pass pass pass pass pass fail pass pass HVMH3DRX2_n02_DayFour1 HVMH3DRX2_n02_DayFour1.fastq.gz Conventional base calls Sanger / Illumina 1.9 68807029.0 0.0 91.0 44.0 20.734991665468343 91.0 pass pass pass pass fail warn pass pass fail fail pass HVMH3DRX2_n02_DayFour2 HVMH3DRX2_n02_DayFour2.fastq.gz Conventional base calls Sanger / Illumina 1.9 44657140.0 0.0 91.0 48.0 19.65486607196572 91.0 pass pass pass pass fail fail pass pass fail fail pass HVMH3DRX2_n02_DayZero1 HVMH3DRX2_n02_DayZero1.fastq.gz Conventional base calls Sanger / Illumina 1.9 63826328.0 0.0 91.0 45.0 16.5226188780301 91.0 pass pass pass pass fail fail pass pass fail fail pass HVMH3DRX2_n02_DayZero2 HVMH3DRX2_n02_DayZero2.fastq.gz Conventional base calls Sanger / Illumina 1.9 53546713.0 0.0 91.0 46.0 19.174624432496213 91.0 pass pass pass pass fail fail pass pass fail fail pass HVMH3DRX2_n02_undetermined HVMH3DRX2_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 796251181.0 0.0 91.0 45.0 11.136878318407476 91.0 pass pass pass pass fail fail pass pass fail fail pass