FastQCFastQC Report
Fri 16 Feb 2024
HVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_H8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_H8d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATATAACTATCCAAACTCACATAATACTGGGACACCTGGGTGACTCAG32.142857142857143No Hit
ATTATATTCCTGGCTTTAAAGTTGAGAGAGTTGCCTGGGAATACTTTCGA21.4285714285714286No Hit
ATACAAGTATGCCTCATTGGATAAAAGCCACTAGCCCCATTCATAGAAAT21.4285714285714286No Hit
GGGCTCAATCCCAGGACCCCAGGATCATGACCTAGGTCTAAGGCAGACGC10.7142857142857143No Hit
GTCTGTAGTAATGTAGATTACTTTTTAGTAAAGGTAGTTTACTTGTCAGT10.7142857142857143No Hit
AAGAAAACCATATCATAATAAAAATTAAACAAAAAATAAATAAACAGAAA10.7142857142857143No Hit
ATATAATGTCTCCTGTAAAATAGTGAGTCACATGTGCGTTTCCAGGAATG10.7142857142857143No Hit
GAATATTTGGCAAAACACTCAGTGAAAGATAGCCCATAGTACCTACTAGT10.7142857142857143No Hit
AGCCTGCCCTTGGCTATAGCAAATGCCCCAGGTGATCATGGAGCTCAGCT10.7142857142857143No Hit
ATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGGTT10.7142857142857143No Hit
CATCAGGCTGACCACTTGGCTGTTTTGGAGTAATTTGAATGGGTCTATCC10.7142857142857143No Hit
GGGCTGGGCTGTCTCTGCTGATGACTGTTTTCTGGACGCCCTCGCAGATC10.7142857142857143No Hit
AAACTAATTGAAATGAAATTCAATAAAATAATCAACAAAAAAGTATGTGT10.7142857142857143No Hit
GAAACGGAGAAACAAATCACGCTCCAATATCACCATTGAGCCAACTTCAA10.7142857142857143No Hit
TTCTTAGACATATTTGAGGACTAAATAAGTGTATGTGGCATACCAAAAGT10.7142857142857143No Hit
ATGCACTTAGGTAGTTTCAATATTTATGTATGCAATAAATCTTGGGAATG10.7142857142857143No Hit
GATATCAGCCCTGAGCATCCATCCATATGCACAGCTGAGCACTGGGGCAT10.7142857142857143No Hit
CCCATTCGCTTCTGGTAGGCCTGCAAATTTTCAAGAAGGTCATCTTTCAG10.7142857142857143No Hit
GCTATGCACTTAGGTAGTTTCATTATTTATGTATGCAATAAATCTTGGTA10.7142857142857143No Hit
AGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAG10.7142857142857143No Hit
CAAATTATATAAAAAAGATAATAGATTTTAGCTGAATGCATCATAAATAT10.7142857142857143No Hit
ATCTTCAGGTCATCAATGCCACCTTTTGGTGGTGTTAATAATCCTGATAG10.7142857142857143No Hit
TACCAAAAGTGCTTAAATATTATTGCTTCCACTATCAGGATTATTACCAC10.7142857142857143No Hit
GAAGATTATTGATTCTTTTTAAATTGACAAGGCCCTGGTAAGACAGCCAG10.7142857142857143No Hit
AATATAGTCAAAGCAGTGGATACAAAGTGTCAGATACTGCTCCAGGCCAT10.7142857142857143No Hit
CTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACAGACAGATGGCT10.7142857142857143No Hit
GTATGATGATACAAGTATGCCTCATTGGATAAAAGCCACTAGCCCCATTC10.7142857142857143No Hit
ATTATACACAATTCCATCTCAGAATGCATCCTGTTTATTAATTTATTTGT10.7142857142857143No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG10.7142857142857143No Hit
GATAGTTATTTAATTATAAGATTTTAATTTATTCATACAGATGATGTGCC10.7142857142857143No Hit
CAGTATGATGATACAAGTATGCCTCATTGGATAAAAGCCACTAGCCCCAT10.7142857142857143No Hit
ATATTAACTAGAGAATTGAGTGTAGCTGACTGCATCCTAGTTATTATTAT10.7142857142857143No Hit
GAGAAAGCAGGGGGAACCTAAGATACAGAGGCATAAGAATCAAACTCAGG10.7142857142857143No Hit
GGTGTAGTCCGCTTTGGTGGCCATCTCCTCTCCAGTGAATGAAAAGATGT10.7142857142857143No Hit
GCCTCTCTTATTCAGTCTTTGTTTTTTCATCCCTATTGTTCTTTGCGTGA10.7142857142857143No Hit
GCTATATACATTTGCAACCGCAAATGCAGACACATTATGTATAGGTTATC10.7142857142857143No Hit
GGTGAATGCCCCATAGCACGAGGACTTCTTTCCCTTTATCATTAATGTAG10.7142857142857143No Hit
GAGAATACACAGAGAATATAGTCAAAGCAGTGGATACAAAGTGTCAGATA10.7142857142857143No Hit
CTGGCTTACTCAAGGCACCATCAGTCACAAAGAAACAGTTTCTAATCTTA10.7142857142857143No Hit
GTTTAGTAGGGATTCCTAGATTTCCAGGATCTTAGTTTATTTTAATTTTA10.7142857142857143No Hit
CCATCGCATATATTAACACTCATCAAAAAAGTGTAAAAGAAAACCCAAAC10.7142857142857143No Hit
ACTTTAATCATCATACTTCTCCCATCGAAATATGTAAAACCGAAACATTT10.7142857142857143No Hit
TCTTTAATGTGGCTGCAGTCACTGCCCTAGCATTAATTACGTTAACGTTT10.7142857142857143No Hit
CGATTGGACCAGGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTT10.7142857142857143No Hit
CAGTGGGAGTGGGAGGAGGAGAAGCAGGCTCACCACCCAGCAGTGATCCC10.7142857142857143No Hit
GATTACGAGGGACGACTAATCCAGAATAGCATAACAATAGCTAGGATGGT10.7142857142857143No Hit
CACCCAAACCATTCAAATAATAATCCATAATTTAAAGAAGATAAACTTTC10.7142857142857143No Hit
TACTGCTCCCATGGAAATATGTAATACCGATACATTTTAACTTGGCCTAA10.7142857142857143No Hit
CTATTTATTTGTCAGAGAGAGAGCAAAAGAGAGAGAGAAAGAGAGCAAGA10.7142857142857143No Hit
ACTCCGGATCAAGCCCTGAGCTGAAGGCAGGTGCTTAACCAACTGAGTCA10.7142857142857143No Hit
TTTCCAGGCTCTTAGTTTATTTTAATTTTATCACTTCAGTACATAATTTT10.7142857142857143No Hit
ATTCTATTTATTTGTCAGAGAGAGAGCAAAAGAGAGAGAGAAAGAGAGCA10.7142857142857143No Hit
GGTAGAGGAAGGGGCATGGAAGGAGCCACTCTGGGCTGGGCTGTCTCTGC10.7142857142857143No Hit
TGCCAACAAAGTATATTAACTAGAGAATTGAGTGTAGCTGACTGCATCCT10.7142857142857143No Hit
AGTCAAAGCAGTGGATACAAAGTGTCAGATACTGCTCCAGGCCATAGCAA10.7142857142857143No Hit
GCCCAATGTGGGGCTTGATCCCAGGACCCTGAGCCAAAGGAGATGCTCAA10.7142857142857143No Hit
TATGTATCCTATCTGATATTCCAGATTCTGGTTGAAAGACACCCACGGTC10.7142857142857143No Hit
GTCTTTTCATCTGTAAAATGGAAAAAGAACAGTACCTATTTCTTAGACAT10.7142857142857143No Hit
ATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGCCGCATT10.7142857142857143No Hit
GCTAATAGTTCTATTTAAGGAAAGGAGAATACACAGAGAATATAGTCAAA10.7142857142857143No Hit
CCCTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAAAGAACATAGTAC10.7142857142857143No Hit
GGATTGGTGGTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGAATCAGC10.7142857142857143No Hit
CCAAAAGGTGGCATTGATGACCAGAAGAATTTGGAGAAGATTGCTATGGC10.7142857142857143No Hit
CCATTTTGCTGTCCGGGCAGATATGCGAGGGCGTCCAGAAAACAGTCATC10.7142857142857143No Hit
CTACATTAAAACATACCAAAAAAAAAAAATAAAAATAAGAAACGGTCCTG10.7142857142857143No Hit
AAATTAAGTTGTCATTTTTTGGGTGTAAGGAGTAAGAAAAAAACTGGAAA10.7142857142857143No Hit
CTGGTTTCGTCCATCTGCAGCAAGGAATCATCAGTAGTTCGTGTGGCTTC10.7142857142857143No Hit
ATCTGGCTCCTTGCTCAGCAGGGAGCCTACTTCTACCTCTGCCTGCCACT10.7142857142857143No Hit
CTCAGCACATGACTGAAATCTTGACGCCCTCGCATATCACCACGGACAGC10.7142857142857143No Hit
ACAAAAGCAACAAAAATGAAGGCAATACTAGTAGTTCTGCTATATACATT10.7142857142857143No Hit
CACTTAGGTAGTTTCATTATTTATGTATGCAATAAATCTTGGTATTGGTG10.7142857142857143No Hit
CTTCAGCTCAGGGCTTGATCCGGAGTCCCATATCTGGCTCCTTGCTCAGC10.7142857142857143No Hit
TCCCAGGACCCCAGGATCATGACCTAGGTCTAAGGCAGACGCCCAACGAC10.7142857142857143No Hit
ATTAAATAGTCAATTAAACCTCTTCCATCTAACTACACCACCCAAAGTTA10.7142857142857143No Hit
AGTAAAGGTAGTTTACTTGTCAGTTGATTTAGTTTACTGCAGAATCTGTA10.7142857142857143No Hit
GTACCTACTAGTTCCTACTCTTATTTCTCAGTCTTTTCATCTGTAAAATG10.7142857142857143No Hit
GCATGTACCATCTGCCTAGTCTGATTAGCAACCTCCATGGCCTCCGCTGC10.7142857142857143No Hit
ACATAGGTGAGATATAAACATACACAATAGAGCAAACCAAAACCCTAACC10.7142857142857143No Hit
GAACAGGAACAGGATACACAATGCACACACTAAACATAACACACCAAAAA10.7142857142857143No Hit
ATAATAACTAGGATGCAGTCAGCTACACTCAATTCTCTAGTTAATATACT10.7142857142857143No Hit
GTACTAGAAAAGAATGTAACAGTAACACACTCTGTTAACCTTCTAGAAGA10.7142857142857143No Hit
TATTAGGTCTGTAGTAATGTAGATTACTTTTTAGTAAAGGTAGTTTACTT10.7142857142857143No Hit
CTTCTGGTAGGCCTGCAAATTTTCAAGAAGGTCATCTTTCAGACCAGCAC10.7142857142857143No Hit
TTGCTGTGGAGAGTGATTCACACTCTGGATTTCCCAGGATCCAGCCAGCA10.7142857142857143No Hit
GCCTCATACAATATCTTCAGAATAGAAAAGGGAAAGATAGTCAAATCAGT10.7142857142857143No Hit
GTCTCTATCAGAATGCAGATGCATATGTTTTTGTGGGGTCATCAAGATAC10.7142857142857143No Hit
AAATACCCAGAATTCAAAATTTACAAATACTACTTTTTTCTTTTATATTC10.7142857142857143No Hit
GTGAGTAATAGGGTGTTTGATAGTTTGTGAAGAAATGTGAATCTTCCAAG10.7142857142857143No Hit
GGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCGTGACATT10.7142857142857143No Hit
ATATTATTGCTTCCACTATCAGGATTATTACCACCACCAAAAGGTGGCAT10.7142857142857143No Hit
TTCCAATTGTGATCGGATGTATATTCTGAAATGGAAGGCTGGTGTTTATA10.7142857142857143No Hit
ACACCATTTTGCTGACCGGGCAGATCTGCGAGGGCGTCCAGAAAACAGTC10.7142857142857143No Hit
GTTAATATACTTTGTTGGCACATCAGCCTTGAAATACCCAGAATTCAAAA10.7142857142857143No Hit
TGCACATTCAGACTCTTGTGTTCTCAATATATTGTTTCTCCAACTCTTGA10.7142857142857143No Hit
GTAGAGGAAGGGGCATGGAAGGAGCCACTCTGGGCTGGGCTGTCTCTGCT10.7142857142857143No Hit
GGTAAATCCTTGTTGATTCCAGCTTTACCCCATCTATTTCTTCTCTGTTT10.7142857142857143No Hit
GCATTTTTGACATCCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGA10.7142857142857143No Hit
AAAGAAATCTACACCAAATTCTTATGGACATAAAAGCCACATATTGGATG10.7142857142857143No Hit
GAGCATGTCTCCTATTTCAGGAACACAGTATTTTTCCCATTTGTGTGGCT10.7142857142857143No Hit
GGTGGTAATAATCCTGATAGTGGAAGCAATAATATTTAAGCACTTTTGGT10.7142857142857143No Hit
TCATTGTTCCCTCTGCCACATCCTACGTGGCTTGAGTTTCCTCTGGGAGT10.7142857142857143No Hit
CAATGGGGCAGTGGCTGTGTTAAAGTACAACGGCATAATAACAGACACTA10.7142857142857143No Hit
CCATCAGTCACAAAGAAACAGTTTCTAATCTTATGATGCAAATTAAACCA10.7142857142857143No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATCTG10.7142857142857143No Hit
ATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGAAGTCGACCCT10.7142857142857143No Hit
CCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAG10.7142857142857143No Hit
GAGTTTATTTTAGTGGCAAAATTTACAAATACTACTTTTTTCTTTTATAT10.7142857142857143No Hit
AGTTAATATACTTTGTTGGCACATCAGCCTTGAAATACCCAGAATTCAAA10.7142857142857143No Hit
CCTTTTGCAAGATTGCTCAGTTCATTGATGCTTATCTCTTGCTGTCTCTT10.7142857142857143No Hit
CTTGTGACCATTGAATTTTCACAATTTCCCAGTTCCTGATTATCCATTGA10.7142857142857143No Hit
GATAATCACTCAATGAGTGACATCGAAGCCATGGCGTCTCAAGGCACCAA10.7142857142857143No Hit
GCCCAGCAGCACTCCTCCCACAGCGGGTGAATACTTCGATCCCAACTTCA10.7142857142857143No Hit
GTGCAGCATCGTATGTCTTTGTTAGGCCTATAGTCACACAGTTGAAATTC10.7142857142857143No Hit
ACTCAATTCTCTAGTTAATATACTTTGTTGGCACATCAGCCTTGAAATAC10.7142857142857143No Hit
ATTTGGGGCCATTGCCGGTTTCATTGAAGGGGGGTGGACAGGGATGGTAG10.7142857142857143No Hit
GTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTA10.7142857142857143No Hit
GTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTACTAGAAAAG10.7142857142857143No Hit
GCAATGGTGTTTGGATAGGGAGAACTAAAAGCATTAGTTCAAGAAACGGT10.7142857142857143No Hit
GACCTGAAGTACTTCAATGAATCAACAAAGAAGAAAATTGAGAAAATAAG10.7142857142857143No Hit
AAGGAGAATACACAGAGAATATAGTCAAAGCAGTGGATACAAAGTGTCAG10.7142857142857143No Hit
GAATACTGACATCAGAGTCACAGCTGGCAATAACAAAAGAGAAGACAGAA10.7142857142857143No Hit
CTTCAGAACATAATTTTAAAAATCACTAAGGCCAAGTTAAATTGTATCGG10.7142857142857143No Hit
GAGTAGAATGTGGGGTACAATTGTTAAAGGTACTATTGGGACTTTTTATT10.7142857142857143No Hit
ACCATCAGAAAATAAAAACAACCAAAATCAAATAAATACAACAATTAAAA10.7142857142857143No Hit
ACATAATACTGGGACACCTGGGTGACTCAGTTGGTTAAGCACCTGCCTTC10.7142857142857143No Hit
AGCAAGCACAGCAGCAGGGGACATGGGAGCACAATAATGGAGGAGTGGCA10.7142857142857143No Hit
ATACATTTGAAAAAAAGACGATCAGTAATCCACAATATAAGGTGCAAGAT10.7142857142857143No Hit
GGAGTGGCAGGCAGAGGTAGAAGTAGGCTCCCTGCTGAGCAAGGAGCCAG10.7142857142857143No Hit
CCTCATAAGTATGACCTGGAAGAGAAGGAAATGGTGAAATTTCTCCAAAT10.7142857142857143No Hit
CACAAAAACAAAAAAAATAAAGAAAAAACTAAACTTTCACAAATATAAAT10.7142857142857143No Hit
TATCCTGACCCCTGCTCATTTTGATGGTGATAACCGTACCATCCATCTAC10.7142857142857143No Hit
GAGCAAAAGCAGGGGAAAACAAAAGCAACAAAAATGAAGGCAATACTAGT10.7142857142857143No Hit
GTATTACATATTTCCATGGGAGCAGAATGATGATACAAGTATGCCTCATT10.7142857142857143No Hit
CACTTCAGCCACACTAAACACGTAAGATAGAAACCTTTCAGCCTCAAAAC10.7142857142857143No Hit
GTTTCATTATTTATGTATGCAATAAATCTTGGTATTGGTGGCTTAATGTT10.7142857142857143No Hit
GATTGCTATGGCCTGGAGCAGTATCTGACACTTTGTATCCACTGCTTTGA10.7142857142857143No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)