FastQCFastQC Report
Tue 6 Feb 2024
HVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_H2b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_H2b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3267
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATATAACTATCCAAACTCACATAATACTGGGACACCTGGGTGACTCAG170.5203550658096112No Hit
ATATTATTGCTTCCACTATCAGGATTATTACCACCACCAAAAGGTGGCAT100.3060912151821243No Hit
TCCTTGTTCCCTCTGCCACATCCTCCGTGGCTTGAGTTTCCTCTGTGAGG100.3060912151821243No Hit
TTATTTATGTATGCAATAAATCTTGGTATTGGTGGCTTAATGTTTTAAGC90.27548209366391185No Hit
GTATATATATAACTATCCAAACTCACATAATACTGGGACACCTGGGTGAC90.27548209366391185No Hit
TACCAAAAGTGCTTAAATATTATTGCTTCCACTATCAGGATTATTACCAC80.24487297214569942No Hit
GTGCTCAGCTGTGCATATGGATGGATGCTCAGGGCTGATATCTGAGCCGA80.24487297214569942No Hit
ATGTAATACCGATACATTTTAACTTGGCCTAAGGGATTTTTAAAATTATG80.24487297214569942No Hit
GTCTCTGCTGATGACTGTTTTCTGGACGCCCTCGCAGATCTGCCCGGTCA80.24487297214569942No Hit
GTCAGAGAGAGAGCAAAAGAGAGAGAGAAAGAGAGCAAGAGCGCGAGCAA80.24487297214569942No Hit
GTACCTACTAGTTCCTACTCTTATTTCTCAGTCTTTTCATCTGTAAAATG70.21426385062748698No Hit
ATTATATTCCTGGCTTTAAAGTTGAGAGAGTTGCCTGGGAATACTTTCGA70.21426385062748698No Hit
CACATAATACTGGGACACCTGGGTGACTCAGTTGGTTAAGCACCTGCCTT70.21426385062748698No Hit
AATCCTGATAGTGGAAGCAATAATATTTAAGCACTTTTGGTATGCCACAT60.18365472910927455No Hit
GGAGAATACACAGAGAATATAGTCAAAGCAGTGGATACAAAGTGTCAGAT60.18365472910927455No Hit
GTGAAAGATAGCCCATAGTACCTACTAGTTCCTACTCTTATTTCTCAGTC60.18365472910927455No Hit
ATACTGGGACACCTGGGTGACTCAGTTGGTTAAGCACCTGCCTTCAGCTC60.18365472910927455No Hit
GTCTTATACAATCCAGCCCTGTTAGTTCTGGATGCTGAACAAAACTCCCG60.18365472910927455No Hit
GTCAGATACTGCTCCAGGCCATAGCAATCTTCTCCAAATTCTTCTGGTCA60.18365472910927455No Hit
AGTTATTATTATCCAACAGTGACTTTTGTTCCTTATTGGTTTAATTTGCA60.18365472910927455No Hit
GTACTATTTGATATGATGACTTAGAAAATTTTTGTTCCATTCTTCTAACT60.18365472910927455No Hit
ATGTAGGACCATGAGCTTGCTGTGGAGAGTGATTCACACTCTGGATTTCC60.18365472910927455No Hit
GAGAATATAGTCAAAGCAGTGGATACAAAGTGTCAGATACTGCTCCAGGC60.18365472910927455No Hit
GAAGGAGCCACTCTGGGCTGGGCTGTCTCTGCTGATGACTGTTTTCTGGA60.18365472910927455No Hit
AAATAAGTGTATGTGGCATACCAAAAGTGCTTAAATATTATTGCTTCCAC60.18365472910927455No Hit
CCTTTATGGAGCTTACAGTCGAGCGAGGGAGGCAAACGTTAACGTAATTA50.15304560759106214No Hit
ACCTAAGTGCATAGCTAATAGTTCTATTTAAGGAAAGGAGAATACACAGA50.15304560759106214No Hit
GTATTTAACATGGGAGATGTTTAATTTGGTCCCGGCAAAATTTTGAATTC50.15304560759106214No Hit
ATATATTGAGAACACAAGAGTCTGAATGTGCATGTGTAAATGGTTCTTGC50.15304560759106214No Hit
TTTGAGGACTAAATAAGTGTATGTGGCATACCAAAAGTGCTTAAATATTA50.15304560759106214No Hit
ATTTAAGGAAAGGAGAATACACAGAGAATATAGTCAAAGCAGTGGATACA50.15304560759106214No Hit
ATTTGATATGATGACTTAGAAAATTTTTGTTCCATTCTTCTAACTCAGGT50.15304560759106214No Hit
AGTAGGTACTATGGGCTATCTTTCACTGAGTGTTTTGCCAAATATTCTGT50.15304560759106214No Hit
GGGTAGAGGAAGGGGCATGGAAGGAGCCACTCTGGGCTGGGCTGTCTCTG50.15304560759106214No Hit
TCATCATACTGCTCCCATGGAAATATGTAATACCGATACATTTTAACTTG50.15304560759106214No Hit
AGCGAAAGCAGGGCAATTATATTCCTGGCTTTAAAGTTGAGAGAGTTGCC50.15304560759106214No Hit
CAATAATGGAGGAGTGGCAGGCAGAGGTAGAAGTAGGCTCCCTGCTGAGC50.15304560759106214No Hit
GCCTTGAAATACCCAGAATTCAAAATTTTGCCGGGACCAAATTAAACATC50.15304560759106214No Hit
GTGAGGGTGAGGGAGCCAGTCGAGAGGAGGGCTATAGCCTCGGCTCAGAT50.15304560759106214No Hit
GTTTTAAGCCATAGTATTTAACATGGGAGATGTTTAATTTGGTCCCGGCA50.15304560759106214No Hit
GTATATTAACTAGAGAATTGAGTGTAGCTGACTGCATCCTAGTTATTATT50.15304560759106214No Hit
GTGTATTCTCCTTTCCTTAAATAGAACTATTAGCTATGCACTTAGGTAGT50.15304560759106214No Hit
GTATTACATATTTCCATGGGAGCAGTATGATGATACAAGTATGCCTCATT50.15304560759106214No Hit
CTACCAGTACCAATGAACTGGCGACAGTTGAATAGATCGCCAAAATCTGG50.15304560759106214No Hit
ACATAATACTGGGACACCTGGGTGACTCAGTTGGTTAAGCACCTGCCTTC50.15304560759106214No Hit
GACCTAATAAAATCAATATTTCTATGAATGGGGCTAGTGGCTTTTATCCA50.15304560759106214No Hit
CATAAATAATGAAACTACCTAAGTGCATAGCTAATAGTTCTATTTAAGGA50.15304560759106214No Hit
GTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGT50.15304560759106214No Hit
ATTCTACACTGTAGAGACCAATTAGAGCACATCCAGAAACTGATTGCCCC40.12243648607284971No Hit
GTGTATAATGATAAAATCTGTACTTTAAAACAAGCAAAATTAAGTTGTCA40.12243648607284971No Hit
GCTAATAGTTCTATTTAAGGAAAGGAGAATACACAGAGAATATAGTCAAA40.12243648607284971No Hit
TTCCTGGACATTTGGACTTACAATGCCGAACTGTTGGTTCTATTGGAAAA40.12243648607284971No Hit
GTTTTCTGGACGCCCTCGCAGATCTGCCCGGTCAGCAAAATGGTGTAACA40.12243648607284971No Hit
AAATAGTACAATGCTTTTCCAGTTTTTTTCTTACTCCTTACACCCAAAAA40.12243648607284971No Hit
ATTCTCTAGTTAATATACTTTGTTGGCACATCAGCCTTGAAATACCCAGA40.12243648607284971No Hit
CCCTTAGGCCAAGTTAAAATGTATCGGTATTACATATTTCCATGGGAGCA40.12243648607284971No Hit
ACTCTGGGCTGGGCTGTCTCTGCTGATGACTGTTTTCTGGACGCCCTCGC40.12243648607284971No Hit
ATACTGCTCCAGGCCATAGCAATCTTCTCCAAATTCTTCTGGTCATCAAT40.12243648607284971No Hit
GTCTAAGGCAGACGCCCAACGACTGAGCCTCCCAGGCGCCTCTCTTCCCT40.12243648607284971No Hit
TTCCTACTCTTATTTCTCAGTCTTTTCATCTGTAAAATGGAAAAAGAACA40.12243648607284971No Hit
GTAGTAATGTAGATTACTTTTTAGTAAAGGTAGTTTACTTGTCAGTTGAT40.12243648607284971No Hit
GATCATGACCTAGGTCTAAGGCAGACGCCCAACGACTGAGCCTCCCAGGC40.12243648607284971No Hit
GCCACATCCTCCGTGGCTTGAGTTTCCTCTGTGAGGGTGAGGGAGCCAGT40.12243648607284971No Hit
GTCTGTAGTAATGTAGATTACTTTTTAGTAAAGGTAGTTTACTTGTCAGT40.12243648607284971No Hit
GTATTCTCCTTTCCTTAAATAGAACTATTAGCTATGCACTTAGGTAGTTT40.12243648607284971No Hit
TATTCATACAGATGATGTGCCAAATCTCACAGAATATTTGGCAAAACACT40.12243648607284971No Hit
GGACATGGGAGCACAATAATGGAGGAGTGGCAGGCAGAGGTAGAAGTAGG40.12243648607284971No Hit
ATTTAACATGGGAGATGTTTAATTTGGTCCCGGCAAAATTTTGAATTCTG40.12243648607284971No Hit
GATTTATTGCATACATAAATAATGAAACTACCTAAGTGCATAGCTAATAG40.12243648607284971No Hit
GAATATAGTCAAAGCAGTGGATACAAAGTGTCAGATACTGCTCCAGGCCA40.12243648607284971No Hit
GTCTTAAGGGATAAAATTAGTTTAAAGGCTTTACAAATAAATTAATAAAC40.12243648607284971No Hit
CTATTTATTTGTCAGAGAGAGAGCAAAAGAGAGAGAGAAAGAGAGCAAGA40.12243648607284971No Hit
TTTCAAGGCTGATGTGCCAACAAAGTATATTAACTAGAGAATTGAGTGTA40.12243648607284971No Hit
GTTAAATACTATGGCTTAAAACATTAAGCCACCAATACCAAGATTTATTG40.12243648607284971No Hit
GTACTGAAGTGATAAAATTAAAATAAACTAAGAGCCTGGAAATCTAGGAA40.12243648607284971No Hit
GGATTATTACCACCACCAAAAGGTGGCATTGATGACCAGAAGAATTTGGA40.12243648607284971No Hit
ATATCAAATAGTACAATGCTTTTCCAGTTTTTTTCTTACTCCTTACACCC40.12243648607284971No Hit
CCTTGTTCCCTCTGCCACATCCTCCGTGGCTTGAGTTTCCTCTGTGAGGG40.12243648607284971No Hit
CTTTTATATTCTTCACAGTGCTTTGTACCCAGTAGAGACAGTGAGTAATA40.12243648607284971No Hit
AAATTAAACATCTCCCATGTTAAATACTATGGCTTAAAACATTAAGCCAC40.12243648607284971No Hit
AGCAAGCACAGCAGCAGGGGACATGGGAGCACAATAATGGAGGAGTGGCA40.12243648607284971No Hit
CTTTAATGTGGCTGCAGTCACTGCCCTAGCATTAATTACGTTAACGTTTG40.12243648607284971No Hit
ACCTATTTCTTAGACATATTTGAGGACTAAATAAGTGTATGTGGCATACC40.12243648607284971No Hit
GTAATAGGGTGTTTGATAGTTTGTGAAGAAATGTGAATCTTCCAAGTTCC40.12243648607284971No Hit
ATAATAACTAGGATGCAGTCAGCTACACTCAATTCTCTAGTTAATATACT40.12243648607284971No Hit
GCCACATACACTTATTTAGTCCTCAAATATGTCTAAGAAATAGGTACTGT40.12243648607284971No Hit
GCTATATACATTTGCAACCGCAAATGCAGACACATTATGTATAGGTTATC40.12243648607284971No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCC40.12243648607284971No Hit
ATACAGATGATGTGCCAAATCTCACAGAATATTTGGCAAAACACTCAGTG40.12243648607284971No Hit
ATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTAC40.12243648607284971No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)