FastQCFastQC Report
Tue 6 Feb 2024
HVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_F9b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_F9b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences148
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGG10.6756756756756757No Hit
CAAAACAACAAAAAAAAAACAAAATTACACAAAAATTAAAATATAATGAA10.6756756756756757No Hit
CCACTGCAGGGTCCATATGGAGATGAGATGAATGTATGCTGCCTGTCTCT10.6756756756756757No Hit
AGTCGAAACCCAGGAAACGCTGAGATTGAAGACCTCATTTTCCTGGCACG10.6756756756756757No Hit
CTTCTGTTCGCATGTCGGATGTCCGTCCTTCATTGTTCCCGCTGAATGCT10.6756756756756757No Hit
GGCTGTGTATGTGTATGTGTTGGGAGAGTTCCGGACAGGGTCCACACAGC10.6756756756756757No Hit
GAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACT10.6756756756756757No Hit
GTAATCCACAATATCAGGTGCAAGATCCCAATGATATTTGCTGCAATGAC10.6756756756756757No Hit
ACTAAGCAGTGACCAAAATTCGGGGATACAACAAATTCACCTATAAACAT10.6756756756756757No Hit
GCTGAAAGTCATCCATGGCTGCACAGGATGCATTGAGCAAGGCCGTATTT10.6756756756756757No Hit
AATCTTCATTCTTTTACTCTCGAACATGTACCCTTTCCCTAGTCTTGCCA10.6756756756756757No Hit
CCTTGATACTACTAAGTGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAA10.6756756756756757No Hit
ATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCT10.6756756756756757No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC10.6756756756756757No Hit
AGCTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTCTTTTGAGC10.6756756756756757No Hit
CCCTTAGTCAGAGGTGACAAGATTGGTCTTGTCTTTAGCCATTCCATGAG10.6756756756756757No Hit
TATTTATATAGGACTTCTTTTTGCTCATGTTGATTCCCACTAACTTGCAG10.6756756756756757No Hit
GCCATAAGCACCACATTCCCTTATACTGGAGATCCTCCATACAGCCATGG10.6756756756756757No Hit
CTTCCAGGACATTATGAGGAGGATGTCAAAAATGCTGTTGGGGGCCTCAA10.6756756756756757No Hit
TTCCATGCACGTGTTATCGCATTTGTGGTAAAATTCAAAGCAGCCGTTTC10.6756756756756757No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA10.6756756756756757No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG10.6756756756756757No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCC10.6756756756756757No Hit
AACTCAATAGCATAAAAAAAAAAAGGCAAGAACAAAAAGCACAGAAAATA10.6756756756756757No Hit
AAATTGCATCCTACTCTGTTCTGGTGGGGCAGCAGCAAAGGGGAGAAGTT10.6756756756756757No Hit
GGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGATCATG10.6756756756756757No Hit
ACTCAGCACCGTCTGGCCAAGACCAACCCACAGTGTCACTGTTTACACCA10.6756756756756757No Hit
ATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAG10.6756756756756757No Hit
AGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAAATAAATACCTAG10.6756756756756757No Hit
GTGAGCGTGAACACAAATCCTAAAATTCCCTTAGTCAGAGGTGACAAGAT10.6756756756756757No Hit
CTTTCAATCTGTGCCGCATTTCATCAATTAACCCCCTTATTTCCTCAAAT10.6756756756756757No Hit
GCAATACAACTTGTCAAACACCCAAGGGTGCTATAAACACCAGCCTCCCA10.6756756756756757No Hit
GAATAATAACAAATTAAAGTATTTGATTGTAAACATTAAAAACCACAACC10.6756756756756757No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCACTAGTTGGAGAAATTTCACCAT10.6756756756756757No Hit
CTTTTCAAACCGTATTTAAAGCGACGATAAATACATTTGAAAAAAAGACG10.6756756756756757No Hit
TATCTGAGGTATAGGACAAAAAGAAAATTATATAATAACAAGGGCCTACC10.6756756756756757No Hit
AGAATAGAGAATTTAAATAAAAAAGTTGATGATGGTTTCCTGGACATTTG10.6756756756756757No Hit
CTCTGTATATTTTCAGAGACTCGAACCGTGTTACCATTCCATTCAAGTCC10.6756756756756757No Hit
CTTCTGGGTTGAACTAATCAGAGGGCGACCCAAAGAGAACACAATCTGGA10.6756756756756757No Hit
GACCAAGCGACTGACTCAAATCTTGAGTTGTATGGAGAGGGAACTTCACC10.6756756756756757No Hit
CCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTT10.6756756756756757No Hit
ATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTT10.6756756756756757No Hit
GTTCAACACTTCCCAGAAGGTCTGGTGCCGCAGGTGCTGCGGTGAAAGGA10.6756756756756757No Hit
GCGGATGCCTTTTGTTGATTGGTATTTCCTCCACTCCTGGTCCTTATGGC10.6756756756756757No Hit
CTCTGAGAGTTTTCCTGAAGAGATTGGGATTAGAATCAGTAGACTAAATA10.6756756756756757No Hit
GTCTAAAAACAAATTTTGATCATCCCTCAAAACCTGTCATTTAATTAAAT10.6756756756756757No Hit
TAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTT10.6756756756756757No Hit
TTCCAATTGTGATCGGATGTATATTCTGAAATGGGAGGCTGGTGTTTATA10.6756756756756757No Hit
GGACCAGGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTTCAGTG10.6756756756756757No Hit
ATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTT10.6756756756756757No Hit
ACTTGAATCGCTGCATCTGCACTCCCATTCGCTTCTGGTAGGCCTGCAAA10.6756756756756757No Hit
GATCAAGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGTTCCACCATTG10.6756756756756757No Hit
GTCCACGATTGCAATACAACTTGTCAAACACCCAAGGGTGCTATAAACAC10.6756756756756757No Hit
AGCTTTGGGTATGAATTTCCTTTTTTAACTAGCCATATTAAATTTTTGTA10.6756756756756757No Hit
ACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAGCCATCTG10.6756756756756757No Hit
ATGTATTACTACTGCAAATGAAAAGAATTTGAAACAAAGTGATACATAGC10.6756756756756757No Hit
AAGTGGAAGAGGCCGGCAAGTGGACTGGGCTGTTCAAAGTTACTTGGAGG10.6756756756756757No Hit
GTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTG10.6756756756756757No Hit
CCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGACATCCTCAT10.6756756756756757No Hit
CTTCCAAGGGGCCACACGCCCAACTAAAGATGATCATTTTAATGGCTTCG10.6756756756756757No Hit
ATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGAT10.6756756756756757No Hit
CAGGATTGAGGAATATCCCGTCTATTCAATCTAGAGGCCTATTTGGGGCC10.6756756756756757No Hit
AGATGGATTCGAGCCGAACGGCTGCATTGAGGGCAAGCTTTCCCAAATGT10.6756756756756757No Hit
GCATAATACTCCTTTAGAAAAACAAGGAATACCTGTACACCAGTTAGTAA10.6756756756756757No Hit
GTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAG10.6756756756756757No Hit
ATCTTGATTAACTCTTTCCTATCTTTTCTCTTCATTGCCCCAGAACATTG10.6756756756756757No Hit
GGAGGAGACAGGAGCAGGAGAAACAAATCGTTAAAACCTAGCGAATTCCC10.6756756756756757No Hit
GGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTC10.6756756756756757No Hit
CCCTTCCCTTTCAAAGTCATGCCCACTTGCTACTGCAAGCCCATACACAC10.6756756756756757No Hit
GAAATCCTCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGA10.6756756756756757No Hit
GTAAACTAATCAAAGAACAAAGATGAAAAATACAAAAAAAACCACTTTCA10.6756756756756757No Hit
CTCCTGGTCCTTATGGCCCAGTATCTGCTTCTCAGTTCCAGGGTATTGGA10.6756756756756757No Hit
GAGATGGAGAACTGATTATAAAGCAAGACTTTAGGTAAGTGGTTTTAAGC10.6756756756756757No Hit
CTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGA10.6756756756756757No Hit
GGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAAC10.6756756756756757No Hit
ATACTGTGTTCTTGAAATAGGAGACATGCTCTTGAGGACTGCGATAGGCC10.6756756756756757No Hit
AACCAATAGTTGGAGAAATTTCACCAATAACTACACTTCCAGCACATACT10.6756756756756757No Hit
ACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTT10.6756756756756757No Hit
GTTCCAGGTTGTCCCTAAGTGCCTGAACAATGAGAAGCAATTTTCTAGAT10.6756756756756757No Hit
CCTTATTTCCTCAAATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTC10.6756756756756757No Hit
AGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGA10.6756756756756757No Hit
AAGTACAAAAACAAATAATAAAAACAGCAAAAGCAAAGTTCAGTACATGT10.6756756756756757No Hit
ATCAAAATCATGACAAAATCAAAAACTTAAACATCCACATAAATATGCTG10.6756756756756757No Hit
CTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGACAT10.6756756756756757No Hit
GGATGAGTTCTCTCATCCACTTTCCGTCTACTCTTCTATATATCTGTCTC10.6756756756756757No Hit
CACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATG10.6756756756756757No Hit
CTCCAAAAATTTAATATGGCTAGTTAAAAAAGGAAATTCATACCCAAAGC10.6756756756756757No Hit
GTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGGCA10.6756756756756757No Hit
GCATGGACCCTCCCAGAAGCCCAGGTTCACTCATACAAAAACTTGACTCT10.6756756756756757No Hit
ATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCCTAT10.6756756756756757No Hit
GACCTGCTGTTGCATCTTCGCCATTGTTTGCTTGGCGCCAAACTCTCCTT10.6756756756756757No Hit
AGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTC10.6756756756756757No Hit
GGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGA10.6756756756756757No Hit
CTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGA10.6756756756756757No Hit
GGATGCTCTGAAATTAAGTATTGAATACCCGAGTCACGAGGGGGAGGGAA10.6756756756756757No Hit
GAACGAGATACAACAACACAGAGTGACTTTACAAGGTTAAATTAAATTTC10.6756756756756757No Hit
GCAATATGCACACATTTGGAAGTTTGTTTCATGTATTCGGATTTCCATTT10.6756756756756757No Hit
TTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGAC10.6756756756756757No Hit
GCCCTAGAATGTATGAGATGATTTCTTGAGGGGCCATACACATTTGCCTC10.6756756756756757No Hit
CTAAAGAGCATGTCAAAAATGAAGTTTGGGTACAAATCGGAATACTTTAA10.6756756756756757No Hit
CCTCATAAGGATGTCCTGGAAGAGAAGTTAATGGTGAAATTTCTCCAACT10.6756756756756757No Hit
CACCCTGACACAACAGTTCAAGGAAGTGATTCTCCTCCAGCCCCCACCAG10.6756756756756757No Hit
CATCACAGTTTCTCCAATCGAATCTCTGTATATATTAAGAGACTCGAACC10.6756756756756757No Hit
ACACAACACAAACTGCAATACATGACGATTAACATATGAACCAGAAGATG10.6756756756756757No Hit
ACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCAT10.6756756756756757No Hit
GTCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACA10.6756756756756757No Hit
GGGTATTGGAGTCCATGGTTTCCACATTCTCATTTGAAGCAATCTGGACC10.6756756756756757No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGA10.6756756756756757No Hit
GTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACG10.6756756756756757No Hit
TCTAATCATTGCAGCAAAAAACATTGCTATCTTGCACCTTCAAATGTTTA10.6756756756756757No Hit
GTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTT10.6756756756756757No Hit
CTCCATTGCTATTGTTCCAACTCCTTTCACCGCAGCACCTGCGGCACCAG10.6756756756756757No Hit
TCTTTCTTCTCTTTTGTTATTGCCAGCTGTGACTCTTATGTCAGTATTCT10.6756756756756757No Hit
ACAAAAACCACTAGTTTAAAGCAAAGCAAAAATGATATATTTACAAAAAA10.6756756756756757No Hit
CATAAATCCTGCCTGCCTGCTTGTGTGTATGGGCTTGCAGTAGCAAGTGG10.6756756756756757No Hit
GAGTTCTAGGTAACACTAGAATGGTGTAAGGTAACGGATTCCAGAGAATC10.6756756756756757No Hit
GTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTA10.6756756756756757No Hit
GTCATACTGTTTAAGGTCTCCAACATCTTTGCAGTCATCAAAGTCTACTT10.6756756756756757No Hit
GGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTC10.6756756756756757No Hit
GTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTC10.6756756756756757No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT10.6756756756756757No Hit
GCAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAA10.6756756756756757No Hit
CACGAAAAACTAAAAATTATCATTTAAATTTCTAACTACAATCAAAATAC10.6756756756756757No Hit
GTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTTGCTACTGCAAGCCCA10.6756756756756757No Hit
GCGTCTACGCTGAAGTCATCGCTCACTGGGCACTGTGAGCGTTAACACAA10.6756756756756757No Hit
GTACATTTCTATCCATGTAGAGAAAAAACTTATATTTGCCTTATTTAGGT10.6756756756756757No Hit
GGGCTACCCCTCTTAGTTTGCATAGTTTCCCGTTATGCTTGTCTTCTAGA10.6756756756756757No Hit
TATCGAGGCCAAGGGTGTTGCCTCTTCCTTTTAAGGACTTTTGATCTCGG10.6756756756756757No Hit
CACCAAAACAGAAATATTATCTAAACCACAAACCTAATTCTGCCTAGAAT10.6756756756756757No Hit
AGGCACCCCATATTTAAGAAATCTTTACCAAACTCAAGGTCACTAAGATT10.6756756756756757No Hit
ATGTTATGCAATTCTGCATTAGTAGTCAAACATAAAAAATTATTTTGATT10.6756756756756757No Hit
GAATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG10.6756756756756757No Hit
GTCTAATGGAGCAAATGGAGTAAAAGGGTTTTCATTCAAATACGGCAATG10.6756756756756757No Hit
CCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAATCC10.6756756756756757No Hit
GTGCGAAAACAGGGGGTAAAAAAAAAAAAATCAACCAAAAACAAATCAAC10.6756756756756757No Hit
ATGATGGACGACTAATCCAGAATAGCATAACAATAGAGAGGATGGTGCTT10.6756756756756757No Hit
GGGGAATTCTTGAGGATGAACAGATGTACCAGAAGTGCTGCAATCTATTC10.6756756756756757No Hit
AAACTATTTATTCCACATACAATATCAAAACCACTATAAGAAACCAAAAA10.6756756756756757No Hit
ATGCATTTAAAGCGACGATAAATACATTTGAAAAAAAGACGATCAGTAAT10.6756756756756757No Hit
GCAAAAAGAAGTCCTATATAAATAAGACAGGGACATTTGAATTCACAAGC10.6756756756756757No Hit
CAGGAGCATTCCTCATAGTGATAATTAGGGGCATTCATTTCGACTGATTT10.6756756756756757No Hit
CATTCACAGTCAATGAGGAAAATTGCATCCTACTCTGTTCTGGTGGGGCA10.6756756756756757No Hit
ACCTGAAAGCTTGACATGGTGTTGGAGTCCATTATGTTTTTGTCACCCTG10.6756756756756757No Hit
GAAACTGATTGCCCCCAGGGAGACTACCAGTACCAATGAACTGGCGACAG10.6756756756756757No Hit
GTGAAACGCAAGGAACTGAGAAGTTGACAATAACTTATTCGTCATCAATG10.6756756756756757No Hit
GTATGACAATTGGAATGGCTAACTTAATATTACAAATTGGAAACATAATC10.6756756756756757No Hit
CCTATACATAATGTGTCTGCATTTGCGGTTGCAAATGTATATAGCAGACC10.6756756756756757No Hit
GATTGAAGACCTCATTTTCCTGGCACGGTCAGCACTCATTCTGAGGGGAT10.6756756756756757No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)