FastQCFastQC Report
Tue 6 Feb 2024
HVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_D9b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_D9b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGATTTCCCAGGATCCAGCCAGCAATGTTACATTTACCCAAATGCAAT21.3793103448275863No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG21.3793103448275863No Hit
ATCCAGAATAGCATAACAATAGAGAGGATGGTGCTTTCTGCTTTTGATGA10.6896551724137931No Hit
GCATATCTCGGTACCACTAGATTTCCAGTTGCTTCGAATGTTATTTTGTC10.6896551724137931No Hit
TACATAAACATATAAAAGGAAGAGAACCAGATTGGTATTAAAAAATAATT10.6896551724137931No Hit
GGATGAGTTCTCTCATCCACTTTCCGTCTACTCTTCTATATATGGGTCCT10.6896551724137931No Hit
ATGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGA10.6896551724137931No Hit
CTGTCTGTGAGACCGATGCTGTGAATCAGCAATCTGTTCACAAGTGGCAC10.6896551724137931No Hit
GGTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAGTGCTGGTC10.6896551724137931No Hit
GGTGATAACCGTACCATCCATCTACCATCCCTGTCCACCCCCCTTCAATG10.6896551724137931No Hit
GGATATTCCTCAATCCTGTGGCCAGTCTCAATTTTGTGCTTTTTACATAT10.6896551724137931No Hit
GTACGGTCTTGGGAGTCTCGATACTGAATCTTGGACAAAAGAAATACACC10.6896551724137931No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC10.6896551724137931No Hit
CAATACAACTTGTCAAACACCCAAGGGTGCTATAAACACCAGCCTCCCAT10.6896551724137931No Hit
TTAAAATACAAAACAATTCACACGAGTAAAACAAGAAATACATGTTTGAA10.6896551724137931No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCAT10.6896551724137931No Hit
GCTCTTCTCCCAACCATTGTGAATTCTTCATACCCTTCATGTACTCTTAT10.6896551724137931No Hit
CTGATCTGGCCTGCGGATGCCTTTTGTTGATTGGTATTTCCTCCACTCCT10.6896551724137931No Hit
GTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGT10.6896551724137931No Hit
CCCTAGAACGCTGAAATGGATTCTTAGATATTATATCTCAGATTTTACAA10.6896551724137931No Hit
AGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAG10.6896551724137931No Hit
ACGATATCTTGCTTTATTGAGAAGTTATTGTCTGTCCCAGTCCATCCGTT10.6896551724137931No Hit
GAATTTTACTATAGCTCAAAATACACAAAATGAACATCTACAAAATCCAC10.6896551724137931No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC10.6896551724137931No Hit
GTGAAGAACTTATATGAAAAGGTAAGAAGCCAGCTAAAAAACAATGCCAA10.6896551724137931No Hit
GTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATT10.6896551724137931No Hit
AGCTCAACCCGATTGATGGACCACTACCTGAGGATAATGAACCAAGTGGG10.6896551724137931No Hit
TGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCGTCCGAGAGCTCG10.6896551724137931No Hit
GCTTCTTTAACTCAAATGATCTTCTCGTCTGAATTTGTGTGTCTCCCCTA10.6896551724137931No Hit
TTCCATGCACGTGTTATCGCATTTGTGGTAAAATTCAAAGCAGCCGTTTC10.6896551724137931No Hit
ATGTCTCATCGTGCCCAAAGTGAATGCTGCACTGTGAATCTCTCCAGGAG10.6896551724137931No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG10.6896551724137931No Hit
AAACAAGGGTGTTGTGTATAATTAAATAAGAAGAAACGAGAAAGCTATTA10.6896551724137931No Hit
GTGGAATGAAAATCAAAATCCTCGAATGTTCCTGGCGATGATTACATATA10.6896551724137931No Hit
CATTTCTTCAATTAACCACCTTATTTCCTCAAATTTCTGTCCCAATTGCT10.6896551724137931No Hit
AGTAGTATTATAAATATATATGAATAAAATAAGAAACTGGTAAACATCCA10.6896551724137931No Hit
CACATGTATAATATCCAAAATCAAAAACACCTTTCACAAATACAAAACAT10.6896551724137931No Hit
CAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAAC10.6896551724137931No Hit
ATACAGATTAAACTTCCAAATGTGTGCATATTGCAGCAAACTTGTTAGTT10.6896551724137931No Hit
TTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAA10.6896551724137931No Hit
CGATATGGGCTCCTGTCTTTAATGGTTCCATTGGAATGTTTGTCATTTAG10.6896551724137931No Hit
GTCATAAGGGAACCATTCATATCATGCTCCCCCTTGGAATGCAGAACCTT10.6896551724137931No Hit
GCCGTAGTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATT10.6896551724137931No Hit
GTGCTTAAGAATCCATGTCATTTTGTTGCTGTGTTCCATGGATATACATG10.6896551724137931No Hit
GCTGTGATGAGAATGGGAGACCTTCACTACCTCCAGAGCAGAAATGAAAA10.6896551724137931No Hit
TTACTGTAATGACCGATGGACCAAGTAATGGACAGGCCTCATACAAGATC10.6896551724137931No Hit
ATACAGACCACAGATCATTTTTATGTTGATAACCGTACAATAAATATACA10.6896551724137931No Hit
CATCAGCAAAAAATAAAAAGATAAGAAAAACATCGGTAAAAAATTCAAAC10.6896551724137931No Hit
AGTCTGGAGTAAATGAATCAGCTGACATGAGTATTGGAGTAACAGTGATA10.6896551724137931No Hit
GAGCAAAAGCAGGTAGATATTTAAAGATGAGTCTTCTAACCGAGGTCGAA10.6896551724137931No Hit
GAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCA10.6896551724137931No Hit
AATCTATACATTGGACAGAATTGTTAATGTCAAAGTATTATCACGAAAGG10.6896551724137931No Hit
CTCAAGGCACCAAACGATCATATGAACAAATGGAGACTGGTGGGGAGCGC10.6896551724137931No Hit
ATCCTGGGATTCAGCCTCACATCGGGGTCTCTGCTCATACGCGAGCTTCC10.6896551724137931No Hit
TAATTTTCATACAAAAATGTTACACTGAAAGATCATCAAAATCTAAGAAA10.6896551724137931No Hit
CTTTTGTCACTATCAAGGAGTATTCAGATCAATGCTCTCCAGGAAACAAG10.6896551724137931No Hit
CTAATGGATGATGATTATCGGGGAAGACTTTGTAATCCCCTGAATCCCTT10.6896551724137931No Hit
GTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGT10.6896551724137931No Hit
AAGCAGGAGTGGACAGATTCTACAGGACCTGCAAGTTAGTGGGAATCAAC10.6896551724137931No Hit
GACTCCTACTGGCCATTTCTTGTCTTATAGTGAAAAGCCTAGTTTTGATT10.6896551724137931No Hit
AGATTATTTCAATAGATACAGAAAAAGCATTTGACAAAATTCCACATCTG10.6896551724137931No Hit
ATCCATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCGATATCGAG10.6896551724137931No Hit
ATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATT10.6896551724137931No Hit
ACACAGATCTTGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTG10.6896551724137931No Hit
GGCCCTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCC10.6896551724137931No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG10.6896551724137931No Hit
ATGTTGTTCTTTATCACTGTTACTCCAATACTCATGTCAGCTGATTCATT10.6896551724137931No Hit
GTTCACAGCAGTAGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGA10.6896551724137931No Hit
GGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTC10.6896551724137931No Hit
AACATCTATTTCATCTTTGACTCCAGTGAAATGGTCAGTAAATGACATCA10.6896551724137931No Hit
GGAATGGGGCATCACCCAATCCATTGTCTGCAAATCGCTTGCGGATATGC10.6896551724137931No Hit
GTTTTGGTTTGAGAGGATTTATAGTGTCAATGGGGACATTATTTGTTGTT10.6896551724137931No Hit
ATCGGAGAGTCACCCAGGGGAGTGGAGGAAGGCTCTATTGGGAAAGTGTG10.6896551724137931No Hit
CAATTGATGCCATCATGACAAGCACTTGCTGACCAAGCGACTGACTCAAA10.6896551724137931No Hit
AGCGACTGAACCCCATGCACCAACTCTTGAGGCATTTCCAAAAAGATGCA10.6896551724137931No Hit
CAATAGGACAGCTCATTAGGGTTCGATATGGGCTCCTGTCTTTAATGGTT10.6896551724137931No Hit
TAACCGTACCATCCATCTACCATCCCTGTCCACCCCCCTTCAATGAAACC10.6896551724137931No Hit
TCTTGGAATCACTTTCTTTCCTCTTATGAAACTTGATACTCTTAAATCTT10.6896551724137931No Hit
GTTCTCTGATATGTGGCATCATTCAGGTTGGAATGCCAAATCATGATATG10.6896551724137931No Hit
CTACCCAAAATACTCAGAGGAAGCAAAATTAAACAGAGAAGAAATAGATG10.6896551724137931No Hit
AGGAACTGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATA10.6896551724137931No Hit
AAGTAGGTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCT10.6896551724137931No Hit
ATAAAAATAAATCCAAGCATTTTCAACGAAAATACAAAACAATCTGAATA10.6896551724137931No Hit
GCCTAACAGCTAATGAGTCAGGAAGGCTAATAGATTTCTTAAAGGATGTA10.6896551724137931No Hit
CTATGGGGCATTCACCATCCATCTACTAGTGCTGACCAACAAAGTCTCTA10.6896551724137931No Hit
GCATCGGTCTCACAGACAGATGGCTACTACCACCAATCCACTAATCAGGC10.6896551724137931No Hit
GAATGTAGGCTGCACACTGATCTGGCCTGCGGATGCCTTTTGTTGATTGG10.6896551724137931No Hit
GATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGT10.6896551724137931No Hit
GTAGTCGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTC10.6896551724137931No Hit
ATTCCAACCGGTCTCCTAATCATTCTTCCGACAGATGCTCTGATTTCTGT10.6896551724137931No Hit
TCATAGCACTTTCTAAGTATGAAGAAAACCACTTCCACCCGCCGCATTGC10.6896551724137931No Hit
TAGCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCG10.6896551724137931No Hit
CTGCTGTTCCTGTTGATATTCTTCCCTCATGGACTCAGGCACTCCTTCCG10.6896551724137931No Hit
CTGGAAACAATTCAATAAAACTATTAACTTATTTAAATGTTTAACAAATT10.6896551724137931No Hit
TGAGTACCCTTCCCTTTCAAAGTCATGCCCACTTGCTACTGCAAGCCCAT10.6896551724137931No Hit
GGATAAGAGTCAGCAAAATGGGAGTAGATGAATACTCCAGCACGGAGAGA10.6896551724137931No Hit
CCCTTGAAATCCCGGCATAGGGGTCAACATTGTAGATTAGTACAAGCCTC10.6896551724137931No Hit
ATGCAGAACCTTCTTCTTGACTCAAGGGGCCTTGCTAAATGACAAACATT10.6896551724137931No Hit
GTCTTCTAACCGAGGTCGAAACGAACGTTCTTTCTATCATCCCGTCAGGC10.6896551724137931No Hit
CTCTTGAGGCATTTCCAAAAAGATGCAAAAGTGCTTTTCCAGAACTGGGG10.6896551724137931No Hit
AAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAGCTTTC10.6896551724137931No Hit
AAGATACATGAATTCAGACAGCTTTAGTGTAATCGTGTAGTCCTTCCCTG10.6896551724137931No Hit
CCCTTTTTGTAGTTAAATACAGGGGACTCCAGCTTCAATTGGAGCTTTTC10.6896551724137931No Hit
GTAGATGGATGGTGAATGCCCCATAGCACGAGGACTTCTTTCCCTTTATC10.6896551724137931No Hit
CTTTCCGTCTACTCTTCTATATATGGGTACTCCTGTTTTCTTAGGGTACT10.6896551724137931No Hit
ACAGCAGGTCTTACTCATATCATGATTTGGCATTCCAACCTGAATGATGC10.6896551724137931No Hit
AAAATGGGACTTATGACTACCCAAAATACTCAGAGGAAGCAAAATTAAAC10.6896551724137931No Hit
TAAAATCAGAGATCATATCAAAATTGTGAAACACAGATTTACAAATTATG10.6896551724137931No Hit
ATGACGAGAGGATCACTTGAATCGCTGCATCTGCACTCCCATTCGCTTCT10.6896551724137931No Hit
CCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATT10.6896551724137931No Hit
CTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA10.6896551724137931No Hit
GTGTTACCATTCCATTCAAGTACTCCGATGAGGACCCCAACTGCATTTTT10.6896551724137931No Hit
GATGAATACACAGTTCACAGCAGTAGGTAAAGAGTTCAACCACCTGGAAA10.6896551724137931No Hit
AAACTATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGA10.6896551724137931No Hit
GTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGG10.6896551724137931No Hit
TTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG10.6896551724137931No Hit
CCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTC10.6896551724137931No Hit
CTCTTAAATCTTCAAATGCAGCAGAGTGGCATGCCATCCACACCAATTGA10.6896551724137931No Hit
TAGTATGCCTAAAGCCACATAACTTGTTAGGGGGCAGGGGCTGTCAGCTA10.6896551724137931No Hit
CAATGGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAA10.6896551724137931No Hit
GGAACAGTGTCCTTACGAATCCACTGTACCGGCTTCTGGTTGCCTTAGGG10.6896551724137931No Hit
GTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTC10.6896551724137931No Hit
CCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGT10.6896551724137931No Hit
ACCCAGGTGTCCCATAAAAGAACTTCTTGACTTGCCAAATTAAGGGTTGT10.6896551724137931No Hit
GTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGAATCAGCAATCTGTTC10.6896551724137931No Hit
AGCAATAATATGTCCAAATGGCAAAATCCCCTAAAGCAATAACAACACAA10.6896551724137931No Hit
ACTCGTAGCCCTGCAAATTTTCAAGAAGGTCATCTTTCAGACCAGCACTG10.6896551724137931No Hit
GGGCTACCCCTCTTAGTTTGCATAGTTTCCCGTTATGCTTGTCTTCTAGA10.6896551724137931No Hit
TCTTCAGTCTCTTCAGCAGATTGAGAGCATGATTGAGGCCGAGTCTTCTG10.6896551724137931No Hit
GGATGCATTGAGCAAGGCCGTATTTATGTACACTCCCTTCATTATGTATT10.6896551724137931No Hit
AAATAATAAAACAAAATGAAATAAAAACCATGAAACAATAAACAAAATAA10.6896551724137931No Hit
GACACATTATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGA10.6896551724137931No Hit
ATTGAGCTCAGTGTCATCATTTGAAAGGTTTGAGATATTCCCCAAGACAA10.6896551724137931No Hit
CAATACTAGTAGTTCTGCTATATACATTTGCAACCGCAAATGCAGACACA10.6896551724137931No Hit
AAAAAACAGAAACCAATTAAACAAACTCAAATCTTAATAGAATAAATAAG10.6896551724137931No Hit
GATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTT10.6896551724137931No Hit
ACAAATGGAGACTGGTGGGGAGCGCCAGGATGCCACAGAAATCAGAGCAT10.6896551724137931No Hit
GGGCACGGTGAGCGTGAACACAAATCCTAAAATTCCCTTAGTCAGAGGTG10.6896551724137931No Hit
GTCCTCGCTCACTGGGCACGGTGAGCGTGAACACAAATCCTAAAATTCCC10.6896551724137931No Hit
TGCATATATATATGCCACATCTTTATCCATTCATCTGTTGATGGGCTGTC10.6896551724137931No Hit
GTCAATGACAGTGGACTGTCCCTCGTGGAGCTTGGATGGACTGAGAAGTC10.6896551724137931No Hit
GTGTAAATGGTTCTTGCTTTACTGTAATGACCGATGGACCAAGTAATGGA10.6896551724137931No Hit
CTTTATCACTGTTACTCCAATACTCATGTCAGCTGATTCATTTACTCCAG10.6896551724137931No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)