FastQCFastQC Report
Fri 16 Feb 2024
HVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_C8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n02_CIVIR_Ferret_Flu_R2_C8d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTACATCCTTTAAGAAATCTATTAGCCTTCCTGACTCATTAGCTGTTAG21.2269938650306749No Hit
TGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCT21.2269938650306749No Hit
GATCTGGCCTGCGGATGCCTTTTGTTGATTGGTATTTCCTCCACTCCTGG21.2269938650306749No Hit
GTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAG21.2269938650306749No Hit
GACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCATG21.2269938650306749No Hit
TGGTACAACTGTTCATCCTCAAGAATTACCCTTTGGCTTGTGTTGAGAAT10.6134969325153374No Hit
ATCCAGAATAGCATAACAATAGAGAGGATGGTGCTTTCTGCTTTTGATGA10.6134969325153374No Hit
GGCATGAGCATGAAACAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGA10.6134969325153374No Hit
CTCTTGGCCTACGATCCTCAGAGAACAGCTGCGAACACAGAATACAGATA10.6134969325153374No Hit
CTCTACCTCAATCATTAAAAAATTACAAACATAAAAAAAAACACCAATAA10.6134969325153374No Hit
ATATAGAAGAGTAGACGGAAAGTGGATGAGAGAACTCATCCTTTATGACA10.6134969325153374No Hit
ATATGAAAAAATCCAGTAGTACATTAAAAAAGAAACATCCCAATTGAATA10.6134969325153374No Hit
CCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTT10.6134969325153374No Hit
GTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGAT10.6134969325153374No Hit
CAATACAACTTGTCAAACACCCAAGGGTGCTATAAACACCAGCCTCCCAT10.6134969325153374No Hit
TATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCTTCAC10.6134969325153374No Hit
CTGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGTCCTATATAAATA10.6134969325153374No Hit
CTACAAAGCAGTAGGTAAAGAGTTCAACCAACAGCAAAAAATAATAGAAA10.6134969325153374No Hit
ATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGACATCCTCATAA10.6134969325153374No Hit
CACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC10.6134969325153374No Hit
AAGTACAACGGCATAATAACAGACACTATCAAGAGTTGGAGAAACAATAT10.6134969325153374No Hit
ATACTACTAAGGGCTGTCACTGAGGAGGGAGCACTAGTTGGAGAAATTTC10.6134969325153374No Hit
GTATTTAAAGCGACGATAAATACATTTGAAAAAAAGACGATCATTAATCC10.6134969325153374No Hit
AGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCT10.6134969325153374No Hit
GACAGGACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGA10.6134969325153374No Hit
CATGAAAACAGAATGGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACA10.6134969325153374No Hit
TGATGACACTGAGCTCAATTGCTCTCTTAGCTCCTCATAATCGATGAAAT10.6134969325153374No Hit
CACTAGAATCAGGATAACAGGAGCATTCCTCATAGTGATAATTAGGGGCA10.6134969325153374No Hit
GTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACAG10.6134969325153374No Hit
GATGAGGACCCCAACTGCATTTTTGACATCCTCATAAGTATGTCCTGGAA10.6134969325153374No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG10.6134969325153374No Hit
GATCAAAACAATAAAAGTAAAAATTCAAACAGATGACAATAGGGAAAACA10.6134969325153374No Hit
TTATCATGTTGTTCTTTATCACTGTTACTCCAATACTCATGTCAGCTGAT10.6134969325153374No Hit
CTAATGAGCTGTCCTAGTGGTGTAGTTCCCTCTCCATTCAACTCATGATT10.6134969325153374No Hit
TGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAA10.6134969325153374No Hit
GTCCAGTATCGTCTAATGGAGCAAATGGAGTAAAAGGGTTTTCATTCAAA10.6134969325153374No Hit
CATAAATACGAGGCATTTCATACGTAAAGTAAACGACATTATCGACGAAC10.6134969325153374No Hit
TGCTACTGCAAGCCCATACACACAAGCAGGCAGGCAGGATTTATGTGCAA10.6134969325153374No Hit
CCTCTTATGAAACTTGATACTCTTAAATCTTCAAATGCAGCAGAGTGGCA10.6134969325153374No Hit
GATTGATGCCAGGGTCGACTTCGAGTCTGGACGGATCAAGAAAGAAGAGT10.6134969325153374No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC10.6134969325153374No Hit
GCAAAAAAAGCCATTTTTCGCACCGGAATGTAGCCCAGAATGTCAACAAA10.6134969325153374No Hit
AAGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGA10.6134969325153374No Hit
GGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGGCGTCTCAAGGC10.6134969325153374No Hit
TCCCAAAAAACAAATAACCCTACTCTACTATACAAAGAATACTCAGTTCA10.6134969325153374No Hit
GAATCACTCTCCACAGCAAGCTCATGGTCCTACATTGTGGAAACACCTAG10.6134969325153374No Hit
GTCATAAGGGAACCATTCATATCATGCTCCCCCTTGGAATGCAGAACCTT10.6134969325153374No Hit
GGAATATCCCGTCTATTCAATCTAGAGGCCTATTTGGGGCCATTGCCGGT10.6134969325153374No Hit
GTCAATTGCTGAGGCAATAATTGTGGCCATGGTATTCTGACAGGAGGATT10.6134969325153374No Hit
CTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAATCCAGC10.6134969325153374No Hit
GGTCTTATTGCTATTTCCGGCTTGAACTTCTTGCTGTATCTTGATGACCC10.6134969325153374No Hit
ATTCAACAGACACTGTAGACACAGTACTAGAAAAGAATGTAACAGTAACA10.6134969325153374No Hit
GAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTCCCTCCTCAGTG10.6134969325153374No Hit
GTATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTG10.6134969325153374No Hit
ATAGCATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCCAGTTC10.6134969325153374No Hit
GCCCCAAATAGGCCTCTAGATTGAATAGACGGGATATTCCTCAATCCTGT10.6134969325153374No Hit
GGTCTATCCCGACCAGTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTT10.6134969325153374No Hit
ACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGG10.6134969325153374No Hit
TTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACC10.6134969325153374No Hit
CAAATGTGCACTGAACTCAAACTCAGTGATTATGAGGTACGTCTAATCCA10.6134969325153374No Hit
GAGGGAAGCTTCACTCGTCGCTTCAAGATGATTGTGACAGCGTAGAAGTG10.6134969325153374No Hit
CGGGATGATAGAAAGAACGTACGTTTCGACCTCGGTTAGAAGACTCATCT10.6134969325153374No Hit
GTTCATTGATGCTTAATGCTGGGCCATCGTTTGTTTTGCTCCAGAGGGTT10.6134969325153374No Hit
ACTCATTTAATATATCCCAAAAAACACAAAAAATCACAATAAATCAGAAT10.6134969325153374No Hit
AATTTAACATCAGCAAAAAAAACTTATATTCATGACAGTCATTTGTTACC10.6134969325153374No Hit
CTGAACTCAAACTCAGTGATTATGATGGACGACTAATCCAGAATAGCATA10.6134969325153374No Hit
TGCACACACATGTGATTTCACTAGAATCAGGATAACAGGAGCATTCCTAA10.6134969325153374No Hit
AATTATGACAAACACAAAACCCTTCCAACCTATTAAACACGGCACTCTTA10.6134969325153374No Hit
GTAGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGAATTTAAATAA10.6134969325153374No Hit
GCACTGGAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTG10.6134969325153374No Hit
TATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTT10.6134969325153374No Hit
CTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCA10.6134969325153374No Hit
GAAAAATTCTTGAGGATGAACAGATGTACCAGAAGTGCTGCAATCTATTC10.6134969325153374No Hit
TTTTTAAACTAATAACCCGATTAGAAACAAGTGTGAATTATATCAAAAAA10.6134969325153374No Hit
CAGAGACTGGTGCACCCCAGCTCAACCCGATTGATGGACCACTACCTGAG10.6134969325153374No Hit
GGACATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGG10.6134969325153374No Hit
GTATAAGACCTTGCTTCTGGGTTGAACTAATCAGAGGGCGACCCAAAGAG10.6134969325153374No Hit
CTCCTGGGTAACACGTTCCATTGTCTGAACTAGGTGTTTCCACAATGTAG10.6134969325153374No Hit
ATCTTGTTCTACTTCAAGCACTAGTTGAAATGATTTCATAAATCTAATAT10.6134969325153374No Hit
GCTCACAAGAGTCAATTGGTGTGGATGGCATGCCACTCTGCTGCATTTGA10.6134969325153374No Hit
TTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCT10.6134969325153374No Hit
TCTATTTCTTCTCTGTTTAATTTTGCTTCCTCTTAGTATTTTGGGTAGAC10.6134969325153374No Hit
GTTCCAGGGTATTGGAGTCCATGGTTTCCACCTGTCTCTTATACACATCT10.6134969325153374No Hit
ACCATGAGCTTGCTGTGGAGAGTGATTCACACTCTGGATTTCCCAGGATC10.6134969325153374No Hit
CAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCG10.6134969325153374No Hit
AGCAAAAGCAGGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAG10.6134969325153374No Hit
AACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGGTGC10.6134969325153374No Hit
CCATTTTGTTTGAGAACATTATGGGTGCCATGCTCAGGATGTTTCTGAAC10.6134969325153374No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA10.6134969325153374No Hit
GGCCCGTATTTTGTGGATATTCCATGCCGGACATCGCAAAGGCAGTGGTA10.6134969325153374No Hit
AAGACACAAAATTTTACAACACACAGCTTCTTTAACTCAAATTATCTTCA10.6134969325153374No Hit
GTCTTACTCATATCATGATTTGGCATTCCAACCTGAATGATGCCACATAT10.6134969325153374No Hit
TAGTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGG10.6134969325153374No Hit
GTACTAGAAAAGAATGTAACAGTAACACACTCTGTTAACCTTCTAGAAGA10.6134969325153374No Hit
AGCAGGAACTTTGACCGCTGATGGCAAAGAGGCCCATCAGGCAATCTGAG10.6134969325153374No Hit
ACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCC10.6134969325153374No Hit
AATATAAACAGTAGCAACCACAAATGCATACACAATAATGATAGTTAAAC10.6134969325153374No Hit
ATAATAGCCAAAGAAGTTAGCAAATCACACTAGTAACATGGTACATGCAA10.6134969325153374No Hit
TATATTCTCAGTTTAATTATGCTACCTATGAGTATTTTGGGTAGTCATAA10.6134969325153374No Hit
CCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAG10.6134969325153374No Hit
ATAAACATATTCGCATGTATAAAATTAGATGACAATGGTATACCATCAAT10.6134969325153374No Hit
GTCTTATACAATCCAGCCCTGTTAGTTCTGGATGCTGAACAAAACTCCCG10.6134969325153374No Hit
CCTCTATGGCCTCCGCTGCCTGTTCACTCGATCCAGCCATCTGTTCCATA10.6134969325153374No Hit
GCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTCC10.6134969325153374No Hit
GTAGAATCTGCTTCTCATTGTTCAGGCACTTAGGGACAACCTGGAACCTG10.6134969325153374No Hit
GTCCTACATTGTGGAAACACCTAGTTCAGACAATGGAACGTGTTACCCAG10.6134969325153374No Hit
CAATTGAAGAGCCATCTGGGCCGTTGCAGGTCCAAGGTCATTGTTTATCA10.6134969325153374No Hit
CAATGGGGCAGTGGCTGTGTTAAAGTACAACGGCATAATAACAGACACTA10.6134969325153374No Hit
GAGGAATATCCCGTCTATTCAATCTAGAGGCCTATTTGGGGCCATTGCCG10.6134969325153374No Hit
ATGTACAACTGATCCCCTCAGAATGAGTGCTGACCGTGCCAGGAAAATGA10.6134969325153374No Hit
AAAATCAACACACACATAAAAGAACAACAAGAAACATAATAACCCAACAT10.6134969325153374No Hit
GTCTGAACTAGGTGTTTCCACAATGTAGGACCATGAGCTTGCTGTGGATA10.6134969325153374No Hit
GTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACG10.6134969325153374No Hit
CCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATT10.6134969325153374No Hit
GGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGC10.6134969325153374No Hit
GCAATATCCTCAATGGAAAATTTCAAACAGCTGCCCAGAGGGCAATGATG10.6134969325153374No Hit
AACTATTACTGGACACTAGTAGAGCCGGGAGACAAAATAACATTCGAAGC10.6134969325153374No Hit
GAAGATGGTCACGCAAAGAACAATAGGGAAGAAAAAACAAAGACTGAATA10.6134969325153374No Hit
GTTCCAACTCCTTTCACCGCAGCACCTGCGGCACCAGACCTTCTGGGAAG10.6134969325153374No Hit
GAACAAATTACTTGTCAATGGTAAATGGCAACTCAGCACCGTCTGGCCAA10.6134969325153374No Hit
AGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATA10.6134969325153374No Hit
GGACAGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGC10.6134969325153374No Hit
GTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAGCAAATATCA10.6134969325153374No Hit
TTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG10.6134969325153374No Hit
CCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCG10.6134969325153374No Hit
GTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTA10.6134969325153374No Hit
GCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGTCT10.6134969325153374No Hit
GTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGAATCAGCAATCTGTTC10.6134969325153374No Hit
AAACAAGGTAGTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGT10.6134969325153374No Hit
TTCCCTAAGTGCCTCAACAATTAGAATCAAATTTCTAGATAAAGCCTAAA10.6134969325153374No Hit
ATCCAGAACTAACAGGGCTGGATTGTATAAGACCTTGCTTCTGGGTTGAA10.6134969325153374No Hit
CCACTTGGCTGTTTTGGAGTAATTTGAATGGGTCTATCCCGACCAGTGAG10.6134969325153374No Hit
GAGCAATTGGGACAGAAATTTGAGGAAATAAGGTGGTTAATTGAAGAAAT10.6134969325153374No Hit
ATATGGGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCATCAGGGCCG10.6134969325153374No Hit
ATAAGACCCAAAGTGAGGAATCAAGAAGGGAGAATGAACTATTACTGGAC10.6134969325153374No Hit
CCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGAC10.6134969325153374No Hit
CATCTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTT10.6134969325153374No Hit
GAAACGCTGAGATTGAAGACCTCATTTTCCTGGCACGGTCAGCACTCATT10.6134969325153374No Hit
GGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGC10.6134969325153374No Hit
TTCTGGGATCCATTCCGGTGCGAACAAGCGCTCTTGTTCTCTGATATGTG10.6134969325153374No Hit
CCCCCCCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAA10.6134969325153374No Hit
CATTTGGATGTAGAATCTCCCGATTCCACCAATCATTCTTCCGACAGATG10.6134969325153374No Hit
GTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGTCTGATTAGCAAA10.6134969325153374No Hit
TTCTTCCCTCATGGACTCAGGCACTCCTTCCGTAGAAGGCCCTCTTTTCA10.6134969325153374No Hit
AGCCCATATCGAACCCGAAGGAGCTGTCCTCTGGGTGACGGTCCCTCTCC10.6134969325153374No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT10.6134969325153374No Hit
GAGGAAATAGAGATAACAACCCACTTTCAAAGAAAAAGGAGAGTAAGAGA10.6134969325153374No Hit
CAGTATATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATT10.6134969325153374No Hit
GTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGC10.6134969325153374No Hit
CAATACTAGTAGTTCTGCTATATACATTTGCAACCGCAAATGCAGACACA10.6134969325153374No Hit
GAGGACCCCAACTGCATTTTTGACATCCTCATAAGTATGTCCTGGAAGAG10.6134969325153374No Hit
GTCCTATATAAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATC10.6134969325153374No Hit
GCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCA10.6134969325153374No Hit
ATATATGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCATCTGGGCCG10.6134969325153374No Hit
CTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTT10.6134969325153374No Hit
AGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTCTGT10.6134969325153374No Hit
AAAAAGAAGAGTAGACATAAAGTACATCAGTTAACTTATACAAAAATACA10.6134969325153374No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG10.6134969325153374No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)