FastQCFastQC Report
Fri 16 Feb 2024
HVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_H8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_H8d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTACAGACCTAATAAAATCAATATTTCTATGAATGGGGCTAGTGGCTTT32.142857142857143No Hit
GTTAAATACTATGGCTTAAAACATTAAGCCACCAATACCAAGATTTATTG32.142857142857143No Hit
GTGAAAGATAGCCCATAGTACCTACTAGTTCCTACTCTTATTTCTCAGTC21.4285714285714286No Hit
AAGTAGTATTTGTAAATTTTGCCACTAAAATAAACTCACTTTAGTTAAAT10.7142857142857143No Hit
GGAAAGACAGAAGGCGCTACCTAACTTAATGGAGCTTACAGTCGAGCGAG10.7142857142857143No Hit
AAGCATGACCGTTTAACTGTGTGAAGCAGGCTCTCTAGTGTTTTCAACTA10.7142857142857143No Hit
ATCGTGGACTGGTGTATCTGAAATGATAATACCAGATCCAGCATTTCTTT10.7142857142857143No Hit
GATAACAGGAGCATTCCTCATAGTGATAATTATGGGCATTCATTTCGACT10.7142857142857143No Hit
GAAAGCAAAAAGGTCTAACAGAAATCCCAAAATTCACATCACAGAATATA10.7142857142857143No Hit
GGGCTGGGCTGTCTCTGCTGATGACTGTTTTCTGGACGCCCTCGCAGATC10.7142857142857143No Hit
AAAGTAGTATTTGTAAATTTTTCCACTATAAAAAACTCACTTTAGTAAAA10.7142857142857143No Hit
GGTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAGTGCTGGTC10.7142857142857143No Hit
GTAAAAATAAAAACAAAATTGATAAAATAAAATAACTTACACAAAAAATA10.7142857142857143No Hit
TCCCTTAAGACTCTTCATCTTTAAAAATATCATTAAATTTCGGGGCGCCT10.7142857142857143No Hit
GAAAATGAGAACGTACTGCATCAGAATCATCTGGGATCACTTGGAGAAGT10.7142857142857143No Hit
ATAAGGAACAAAAGTCACTGTTGGATAATAATAACTAGGATGCAGTCAGC10.7142857142857143No Hit
GCTATGCACTTAGGTAGTTTCATTATTTATGTATGCAATAAATCTTGGTA10.7142857142857143No Hit
CTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCC10.7142857142857143No Hit
GTTACATTCTTTTCTAGTACTGTGTCTACAGTGTCTGTTGAATTGTTCGC10.7142857142857143No Hit
GTTTGAGAGTTTGTGAAGAAATGTGAATCTTCCAAGTTCCTTATAGGAAA10.7142857142857143No Hit
TACTAAAAGATCAACATGCACACAGTCCAAAGAATGCATATAACAACCTA10.7142857142857143No Hit
GAGGTAGAAGTAGGCTCCCTGCTGAGCAAGGAGCCAGATATGGGACTCCG10.7142857142857143No Hit
AGTGATAACAACAAAAAGAAAAAGAAAAATTTCAAAAACAAACACATTGA10.7142857142857143No Hit
TACAGACATACATTTAAAACTTGTTTGGCTGGTTATTCCTTGTTCATTCC10.7142857142857143No Hit
ATTTAAGGAAAGGAGAATACACAGAGAATATAGTCAAAGCAGTGGATACA10.7142857142857143No Hit
ATTTATGGATGCTCAGGGCTGATATCTGAGCCGAGGCTATAGCCCTCCTC10.7142857142857143No Hit
CTGCAGCGTAGACGCTTTGTCCAAAATGCCCTAAATGGGAATGGGGACCC10.7142857142857143No Hit
ATTAAACATCTCCCATGTTAAATACTATGGCTTAAAACATTAAGCCACCA10.7142857142857143No Hit
ACCTAATAAAATCAATATTTCTATGAATGGGGCTAGTGGCTTTTATCCAA10.7142857142857143No Hit
GACCTAGCAATAAATACGTAAAAGTATAACTAACACAATCCAGTATAAAC10.7142857142857143No Hit
CATTTCTTCATTAGTACTCTCAATTTTTCTACAATGAACTTGATATTACT10.7142857142857143No Hit
ATATATGGGTCCTCCTGTTTTCTTAGGGTCCTTCCCAGCACTGGGATGCT10.7142857142857143No Hit
AAACTAAATCAACTGACAAGTAAACTACCTTTACTAAAAAGTAAACTACA10.7142857142857143No Hit
CCCTATTACTCACTGTCTCTACTGGGTACAAAGCACTGTGAAGAATATAA10.7142857142857143No Hit
ATATATAACTATCCAAACTCACATAATACTGGGACACCTGGGTGACTCAG10.7142857142857143No Hit
ATGTAACAGTAACACACTCTGTTAACCTTCTAGAAGACAAGCATAACGGG10.7142857142857143No Hit
GTATGGGTTCATTATAAAAGGAAGGTCTCATTTGAGAAATGATACTGATG10.7142857142857143No Hit
CAAGAGATAAGCATCAATGAACTGAGCAATCTTGCAAAAGGCTGTCTCTT10.7142857142857143No Hit
TATGTACTGAAGTGATAAAATTAAAATAAACTAAGAGCCTGGAAATCTAG10.7142857142857143No Hit
CCTTAAGACTCTTCATCTTAAAAAAATTAATTAAATATCGGGCAGCCAGC10.7142857142857143No Hit
CGGTCGATTCGAGCCATGCCAGTTATCCCTGCACACACATGTGATTTCAC10.7142857142857143No Hit
ATCAAGTAAATATACTAAACACTAATAAACAATTTTCCAATAATAAACTA10.7142857142857143No Hit
GCCTCAATAAGCATCGAAAGTATTCCCAGGCAACTCTCTCAACTTTAAAG10.7142857142857143No Hit
GCATCAGAATCATCTGGGATCACTTGGAGAAGTAAACTACAGATTCTGCA10.7142857142857143No Hit
GAACTTGATATTACTTGAGTTTTTTTTTTTTTAAGATTCTATTTATTTGT10.7142857142857143No Hit
CTTGAGTTTCCTCTGTGAGGGTGAGGGAGCCAGTCGAGAGGAGGGCTATA10.7142857142857143No Hit
CAATGTTACATTTACCCAAATGCAATGGGGCTACCCCTCTTAGTTTGCAT10.7142857142857143No Hit
ATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTATTCAACTGGTGC10.7142857142857143No Hit
GAAAAGTATTTTATTGGCTTAAACCAGCAAGCAAAGAACAGATGGCATTG10.7142857142857143No Hit
GAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTGCTGACATGACA10.7142857142857143No Hit
ATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGCTG10.7142857142857143No Hit
ACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGA10.7142857142857143No Hit
GATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAATGGTGC10.7142857142857143No Hit
GATGGTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAGTGCTG10.7142857142857143No Hit
TTATGGAGCTTACAGTCGAGCGAGGGAGGCAAACGTTAACGTAATTAATG10.7142857142857143No Hit
GGGTACTCACTGGTCGGGATAGACCCATTCAAATTACTCCAAAACAGCCA10.7142857142857143No Hit
GAATGGGAGACCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAG10.7142857142857143No Hit
TGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATT10.7142857142857143No Hit
CCACCAAAAGGTGGCATTGATGACCAGAAGAATTTGGAGAAGATTGCTAT10.7142857142857143No Hit
CTTGGAGAAGTAAACTACAGATTCTGCAGTAAACTAAATCAACTGACAAG10.7142857142857143No Hit
CTGATTAGTTCAACCCAGAAGCAAGGTCTTATACAATCCAGCCCTGTTAG10.7142857142857143No Hit
ATGCACTTAGGTAGTTTCATTATTTATGTATGCAATAAATCTTGGTATTG10.7142857142857143No Hit
GATTAATGGATTGGTGGTAGTAGCCATCTGTCTGTGAGACCGATGCTGTG10.7142857142857143No Hit
ATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATT10.7142857142857143No Hit
ATTGAGTGTAGCTGACTGCATCCTAGTTATTATTATCCAACAGTGACTTT10.7142857142857143No Hit
CAATTGGAAAATGTCCAAAATATGTAAAAAGCACAAAATTGAGACTGGCC10.7142857142857143No Hit
AAATGGTGTAACAGAAATGCCCCAGTGCTCAGCTGTGCATATGGATGGAT10.7142857142857143No Hit
GTTAAGCACCTGCCTTCAGCTCAGGGCTTGATCCGGAGTCCCATATCTGG10.7142857142857143No Hit
CAATAATGGAGTAGTGGAAGTCAGAGTAAGTAGTACTCACCAATAATATC10.7142857142857143No Hit
GGCTTAAAACATTAATCCACCAATACCAAGATTTATTGCATACATAAATA10.7142857142857143No Hit
CATATGCACAGCTGAGCACTGGGGCATTTCTGTTACACCATTTTGCTGAC10.7142857142857143No Hit
CCCAGGACCCCAGGATCATGACCTAGGTCTAAGGCAGACGCCCAACGACT10.7142857142857143No Hit
TTATGGCCCAGTATCTGCTTCTCAGTTCCAGGGTATTGGAGTCCATGGTT10.7142857142857143No Hit
GAGCAAAAGCAGGGACACAAGGGGACACACTGTCCCGACTGAAAGGAAGG10.7142857142857143No Hit
GGGCAATTATATTCCTGGCTTTAAAGTTGAGAGAGTTGCCTGGGAATACT10.7142857142857143No Hit
CATTACTACATACCTAAAAAAATCAATATTTCTATGAATGTGGCTACATG10.7142857142857143No Hit
AATTATAAAGGAATATACAATGAAAGTTAAGACACAGCATTAATTTTCAT10.7142857142857143No Hit
GTGCATGCTTCCCGCCGGGTCCTCCGACCAGCTTGGGGCTGTGGATCTGG10.7142857142857143No Hit
CTTCTTGGTCATGTTGTCTCTTACTCTCCTTTTTCTTTGAAAGTGGGTTG10.7142857142857143No Hit
ATGCACAGCTGAGCACTGCGTCATTTCTTTTACACAATTTTGCTGACCGG10.7142857142857143No Hit
ACATCTCCCATGTTAAATACTATGGCTTAAAAAATTAAGCCACCAAAACC10.7142857142857143No Hit
CTATTAGCTATGCACTTAGGTAGTTTCATTATTTATGTATGCAATAAATC10.7142857142857143No Hit
ATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATACTC10.7142857142857143No Hit
ATGTTACATTTACCCAAATGCAATGGGGCTACCCCTCTTAGTTTGCATAG10.7142857142857143No Hit
CAATGAACTTGATATTACTTGAGTTTTTTTTTTTTAAGATTCAATTTATT10.7142857142857143No Hit
CCCCTCTTAGTTTGCATAGTTTCCCGTTATGCTTGTCTTCTAGAAGGTTA10.7142857142857143No Hit
TGCCAGGGTCGACTTCGAGTCTGGACGGATCAAGAAAGAAGAGTTCTCTG10.7142857142857143No Hit
CCTATACATAATGTGTCTGCATTTGCGGTTGCAAATGTATATAGCAGAAC10.7142857142857143No Hit
CTTCCTACCTTTATGGAGCTTACAGTCGAGCGAGGGAGGCAAACGTTAAC10.7142857142857143No Hit
AAATAAGTGTATGTGGCATACCAAAAGTGCTTAAATATTATTGCTTCCAC10.7142857142857143No Hit
GTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCCAGGAATATTTGA10.7142857142857143No Hit
CATCAAGATACAGCAAGAAGTTCAAGCCGGAAATAGCAATAAGACCCAAA10.7142857142857143No Hit
GTACAATGCTTTTCCAGTTTTTTTCTTACTCCTTACACCCAAAAAATGAC10.7142857142857143No Hit
CAGCCACAGTGTGGCCTTGAACCTCTGCACTTTGCTGGACATCTCAATGG10.7142857142857143No Hit
GATTATTACCACCACCAAAAGGTGGCATTGATGACCAGAAGAATTTGGAG10.7142857142857143No Hit
ATCAAGAGTTGGAGAAACAATATATTGAGAACACAAGAGTCTGAATGTGC10.7142857142857143No Hit
ACCTATTTCTTAGACATATTTGAGGACTAAATAAGTGTATGTGGCATACC10.7142857142857143No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGA10.7142857142857143No Hit
GTAATAGGGTGTTTGATAGTTTGTGAAGAAATGTGAATCTTCCAAGTTCC10.7142857142857143No Hit
TGATTACAAAGAGAACCGGTTCATTGAAATTGGAGTAACACGGAGGGAAG10.7142857142857143No Hit
TCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTCGA10.7142857142857143No Hit
TCCTCTGTGAGGGTGAGGGAGCCAGTCGAGAGGAGGGCTATAGCCTCGGC10.7142857142857143No Hit
GCAAAAGAGAGAGAGAAAGAGAGCAAGAGCGCGAGCAAGCACAGCAGCAG10.7142857142857143No Hit
ACTCAATTCTCTAGTTAATATACTTTGTTGGCACATCAGCCTTGAAATAC10.7142857142857143No Hit
GGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTC10.7142857142857143No Hit
CAATAATGGAGGAGTGGCAGGCAGAGGTAGAAGTAGGCTCCCTGCTGAGC10.7142857142857143No Hit
GCTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTCTTTTGAGCT10.7142857142857143No Hit
ATACTGGGACACCTGGGTGACTCAGTTGGTTAAGCACCTGCCTTCAGCTC10.7142857142857143No Hit
GTAATGGTGAAATTTCTCCAACTATTGCTCCCTCCTCAGTGAAAGCCCTT10.7142857142857143No Hit
ATCAATACCAATGAATAAGCAAGACGCCAAAACAATGAAACTCAAAGGAA10.7142857142857143No Hit
ATCATGACTCGAACAAAGGTGTAACGGCAGCATGTCCTCATGCTGGAGCA10.7142857142857143No Hit
TATTTGAGGACTAAATAAGTGTATGTGGCATACCAAAAGTGCTTAAATAT10.7142857142857143No Hit
CAATAAATCTTGGTATTGGTGGCTTAATGTTTTAAGCCATAGTATTTAAC10.7142857142857143No Hit
CTTAGGTAGTTTCATTATTTATGTATGCAATAAATCTTGGTATTGGTGGC10.7142857142857143No Hit
CATCAGAACAGATCAGGTTGGATGTGGGAGCATTACACGCGAGGGGCTTT10.7142857142857143No Hit
ATGGAGGAGTGGCAGGCAGAGGTAGAAGTAGGCTCCCTGCTGAGCAAGGA10.7142857142857143No Hit
ACCTGATAGTGGAAGCAATAATATATAAGCACTTATGGTATGCCACATAC10.7142857142857143No Hit
AATGTGAATCTTACAAGTTCCTAATAGCAAAAGAGGTTATTAGGGATTCA10.7142857142857143No Hit
GATCCCAGGACCCTGAGCCAAAGGAGATGCTCAACCATCTGAGCCACCCA10.7142857142857143No Hit
GTCAAAAATGGGACTTATGACTACCCAAAATACTCAGAGGAAGCAAAATT10.7142857142857143No Hit
CCATTATTGTGCTCCCATGTCCCCTGCTGCTGTGCTCGCTCGCGCTCTTG10.7142857142857143No Hit
ATTCTATAGTCCTTTAAATCTTTAAAAACACAATGCAGACTATTTGTTAA10.7142857142857143No Hit
TGGCTGCAGTCACTGCCCTAGCATTAATTACGTTAAAGTTTGCCTCCCTC10.7142857142857143No Hit
GAAAGGAGAATACACAGAGAATATAGTCAAAGCAGTGGATACAAAGTGTC10.7142857142857143No Hit
GGGTAGAGGAAGGGGCATGGAAGGAGCCACTCTGGGCTGGGCTGTCTCTG10.7142857142857143No Hit
GTACAACGGCATAATAACAGACACTATCAAGAGTTGGAGAAACAATATAT10.7142857142857143No Hit
AACTAGGAGCCTGGAAATCTAGGAATCCCTACTAAACTCTTTTCCTATAA10.7142857142857143No Hit
GAGTAGGAACTAGTAGGTACTATGGGCTATCTTTCACTGAGTGTTTTGCC10.7142857142857143No Hit
AGGCCATAGCAATCTTCTCCAAATTCTTCTGGTCATCAATGCCACCTTTT10.7142857142857143No Hit
AAACAAAACATAAAAAAAAAAATATAAAAAAGACAGAAAAAAATTACCAC10.7142857142857143No Hit
CACATACACTTATTTAGTCCTCAAATATGTCTAAGAAATAGGTACTGTTC10.7142857142857143No Hit
GCTCATTTTGATGGTGATAACCGTACCATCCATCTACCATCCCTGTCCAC10.7142857142857143No Hit
CCTCTGCCTGTCACTCCTCCATTATTGTGCTCCCATGTCCCCTGCTGCTG10.7142857142857143No Hit
GGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATTGCATGATCAAGG10.7142857142857143No Hit
CTATTAGAAGAGGCCTTATTTTCTCAATTTTCTTCTTTGTTGATTCATTG10.7142857142857143No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)