FastQCFastQC Report
Tue 6 Feb 2024
HVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_E9b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_E9b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT21.2345679012345678No Hit
AGAATGGAGAGGTCAGAGGAAGCGCAGACTCCCCGCCGAACAGGGAGCCT21.2345679012345678No Hit
CTGAGAATGTAGGCTGCACACTGATCTGGCCTGCGGATGCCTTTTGTTGA10.6172839506172839No Hit
CAACTGAGCCACCAAGGCGCCCCTCATTTCTTTCTTTCTTTCTTTCTTTT10.6172839506172839No Hit
CTGTTGCAGTCTGTGCTGTCCAAGTTATCCGAGTCACTATTCCCACCTGT10.6172839506172839No Hit
GCATATCTCGGTACCACTAGATTTCCAGTTGCTTCGAATGTTATTTTGTC10.6172839506172839No Hit
GCCAAGGGTGTTGCCTCTTCCTTTTAAGGACTTTTGATCTCGGCGGAGCC10.6172839506172839No Hit
GTCCTACATTGTGGAAACACATAGATCAGACAAAGGAAAGTCTTACACAG10.6172839506172839No Hit
CTCCTTCCTTAGAAGGCCCTCTTTTCAAACCGTCTTAAAAGCGACGATAA10.6172839506172839No Hit
ACCTGATAAGCCTTCTGACATAGCGTTGACTCCAAATGACCAGATCCCAC10.6172839506172839No Hit
ATCCACGCCCTAATGATAAGACAGGCAGTTGTGGTCCAGTATCGTCTAAT10.6172839506172839No Hit
GTACTCACTGGTCGGGATAGACCCATTCAAATTACTCCAAAACAGCCAAG10.6172839506172839No Hit
ATCTGAAGGGGACCCCGCCTGGGTGGCTCCAGATCTCCAGGCCCAGTGAG10.6172839506172839No Hit
AAAGCAGGAAGACGGAAAACAAACCTGTATGGGTTCATTATAAAAGGAAG10.6172839506172839No Hit
GTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAGTGCTGGTCT10.6172839506172839No Hit
GGTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAGTGCTGGTC10.6172839506172839No Hit
GAGCTAGGATGAGTCCCAATATTTCTCATTGCATGTACCATCTGCCTAGT10.6172839506172839No Hit
CAATAATATAAAGAAACAAAAACAATACAAAAAAACAAATCATAAACCCA10.6172839506172839No Hit
CAATTAGTAAAACTAAATAAAAATGCAAACCAAATACCAAAACCAAAATC10.6172839506172839No Hit
AGCGAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAGC10.6172839506172839No Hit
ACAAAGTTTCTCCCAGTAGCCGGCGGAACAGGCAGTGTTTATATTGAAGT10.6172839506172839No Hit
GCAGGCAGACAGAATGGCAGGCAGGGGCAGAGAGGCAGGCAGAGATTGGA10.6172839506172839No Hit
AGCCTGATGAGACCAAATGAAAACCCAGCTCACAAGAGTCAATTGGTGTG10.6172839506172839No Hit
AACCAACTGAGCCACCCAGGCGCCCCTCATTTCTTTCCTGTCTCTTATAC10.6172839506172839No Hit
GTATAAGTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTGGG10.6172839506172839No Hit
GTATAATGGACTTCACAACCCAGATCCTGCTTGGAACCCTATGATAAAAT10.6172839506172839No Hit
GTCCTGGGACCGAGTCCTACGTCAGGCTCCCTGTTCGGCGGGGAGTCTGC10.6172839506172839No Hit
ACTCAATTCAACTTGGGAATCAAAATCAGATTGAAACATGCAATCAAAGC10.6172839506172839No Hit
CCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCATGTCAAAG10.6172839506172839No Hit
ACTCCAAAACAGCCAAGTGGTCAGCCTGAAGAGACCAAATGAAAACCCAG10.6172839506172839No Hit
ACATGGTGTTGGAGTCCATTATGTTTTTGTCACCCTGCTTTCGCTCTGTC10.6172839506172839No Hit
AATCTGGACCCCTCTTGTGGAAAGCTTTCCTCTTGGAATCACTTTCTTTC10.6172839506172839No Hit
GGAGGATTGCATGATCAAGGCAGTTAGGGGCGATCTGAACTTTGTCAATA10.6172839506172839No Hit
GTTTCTACTAGTCCCGTTGGCTTACCATCCATTGATCCATCAGGCAGCTC10.6172839506172839No Hit
TTCAGGACCCTCTGGCTTTGTTCTAGGTCGAGGTTTGGCTTCCCCCAAAG10.6172839506172839No Hit
GTCCAAGGATGGGGGGAAAAATGTTGCCTGTTGAAACTTGGAGTCCCAAC10.6172839506172839No Hit
CAAAAGCAGGCTCTTGCAGCTAAAAGAGAGAAAAGAAAAGAAAAGAGAAA10.6172839506172839No Hit
GACCCTGAGATCATGACCCGAGCTGCAGCGGCTTAACCAACTGAGCCACC10.6172839506172839No Hit
GCTCAGTTGGTTGAGCAACTGCCTTTGGCTCAGGTCATGATCCTGGAGTC10.6172839506172839No Hit
GTCCTATTGGTGAAGTTCCCTCTCCATACAACTCAAGATTTGAGTCAGTC10.6172839506172839No Hit
ATGTTCCAGGTGGACCTCTGTTTAATGGACTTCACAACCCAGATCCTGCT10.6172839506172839No Hit
CTGTTCCCATCCTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCA10.6172839506172839No Hit
GAGCTACCCAGCTTTGGAGTGTCTGGAGTAAATGAATCAGCTGACATGAG10.6172839506172839No Hit
GTTGCTCAACCAACTGAGCCACCCAGGTGCCCCTCATTTCTGCTTTCTTG10.6172839506172839No Hit
GTACAGGTGGGAATAGTGACTCGGATAACTTGGACAGCACAGACTGCAAC10.6172839506172839No Hit
GATTAGCAACCTCCATGGCCTCCGCTGCCTGTTCACTCGATCCAGCCATC10.6172839506172839No Hit
TTTGAGAGAGAGAGTGTGAGAATGGAGAGGTCAGAGGAAGCGCAGACTCC10.6172839506172839No Hit
AGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGTTATCGCCTGTC10.6172839506172839No Hit
AGCGCAGACTCCCCGCCGAACAGGGAGCCTGACGTAGGACTCGGTCCCAG10.6172839506172839No Hit
GGTTAAGCCGCTGCAGCTCGGGTCATGATCTCAGGGTCTGGAGATGGAGT10.6172839506172839No Hit
ATCCTACATTAATGATAAAGGGAAAGAAGTCCTCGTGCTATGGGGCATTC10.6172839506172839No Hit
GAAATAAGGAGAGTTTGGCGCCAAGCAAACAATGGCGAAGATGCAACAGC10.6172839506172839No Hit
ATTCAGAACTACCGGAGGATGAAGATGAAGAGGAGAATGATGAAGATGTG10.6172839506172839No Hit
ATACATAATGAAGGGAGTGTACATAAATACGGCCTTGCTCAATGCATCCT10.6172839506172839No Hit
GGATCGAAAGATACCTCCCCCCATTGGAACAGAGAGGCTAGCCCGGATTC10.6172839506172839No Hit
CTTTTGATCTCGGCGGAGCCGATCAAGGAATGGGGCATCACCCAATCCAT10.6172839506172839No Hit
GTCCACGATTGCAATACAACTTGTCAAACACCCAAGGGTGCTATAAACAC10.6172839506172839No Hit
CTGCTATACAAGACGTTACGGGTGCGCATATTGATGTGGATAAACACTGT10.6172839506172839No Hit
ACCCAGGCGCCCCACTTTTTTTTTTTTTTAATAGAGCCATCCTAATGGGT10.6172839506172839No Hit
CATATGCAGTGGGATTTTCGGAGACAATCCACGCCCTAATGATAAGACAG10.6172839506172839No Hit
GTAAGTGACATCGTACGTGGAAGAGTAAGGTACAAACAGGTTAGGGGGAA10.6172839506172839No Hit
GTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTG10.6172839506172839No Hit
CTACACACCCATTACACAACATCCAGAAACATATTCCAACCACTTAGACT10.6172839506172839No Hit
GTGTCTACAGTGTCTGTTGAATTGTTCGCATGATAACCTATACATAATGT10.6172839506172839No Hit
GACATAGGCTCCCTGCTGAGCAAGGATCCTCTGGTGGGACTCCATCTCCA10.6172839506172839No Hit
ACGTAGGACTCGGTCCCAGGACTCCAGGATCATGACCTGAGCCAAAGGCA10.6172839506172839No Hit
GAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGAAA10.6172839506172839No Hit
ATGTGGAGCAAGAAGTTCCCATAGAACCTCCTAGTGCAACAACCACCACC10.6172839506172839No Hit
CTTCTTCGGTCTGGTTAGCTGAGGTGATGGGATTTCCCCTTTGAGAGCAG10.6172839506172839No Hit
ATCAGGCAGTCCCAGGACAAGAAGCCCGAGGAACCCACCAGCTCAGGTAA10.6172839506172839No Hit
ACCTGGCATTCCCCTCTGACACCCCCTTTCTTTGCCCATTGTATCCAATC10.6172839506172839No Hit
CATTTGAAGCAATCTGGACCCCTCTTGTGGAAAGCTTTCCTCTTGGAATC10.6172839506172839No Hit
ATGAAAACCCTTTTACTCCATTTGCTCCATTAGACGATACTGGACCACAA10.6172839506172839No Hit
AAAAACTAACAATCAAAATTACAAATTTTAATATAAATAATAATAAAATA10.6172839506172839No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.6172839506172839No Hit
CCATTCTCACACTCTCTCTCTCAAATAAATAAATAAAATTTAAAAAAAAA10.6172839506172839No Hit
GTCAGGCCCCCTCAAAGCCGAGATCGCGCATAGACTGGAAAGTGTCTTTG10.6172839506172839No Hit
TGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCG10.6172839506172839No Hit
GCATAAGACAGAACAATCTCAGAAACAAACCCGAACCACCAACCTCACTT10.6172839506172839No Hit
GAGTCTGAATGTGCATGTGTAAATGGTTCTTGCTTTACTGTAACTGTCTC10.6172839506172839No Hit
GTTGTACTTTAACACAGCCACTGCCCCATTGTCTGGGCCAGAAATTCCAA10.6172839506172839No Hit
GTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCT10.6172839506172839No Hit
CCTGATAAGCCTTCTGACATAGCGTTGACTCCAAATGACCAGATCCCACT10.6172839506172839No Hit
TTTCATTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTT10.6172839506172839No Hit
AAATACTAAGAGGAAGCAAAAAAAAAAATATAAGAAATATATGTGGTAAA10.6172839506172839No Hit
TCTTGAACTAATGCTTTTAGTTCTCCCTATCCAAACACCATTGCCGTATT10.6172839506172839No Hit
CCTTATTTCCTCAAATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTC10.6172839506172839No Hit
GAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACC10.6172839506172839No Hit
CACAATGGTTGGGAGAAGAGCAACAGCTATTCTCAGAAAGGCAACCAGGA10.6172839506172839No Hit
GATGTCAGTATTCTTGCCCCCACTTCATTTGGGAAAACAACTTCCATAAT10.6172839506172839No Hit
CGGGAAACTATGCAAACTAAGAGGGGTAGCCCCATTGCATTTGGGTAAAT10.6172839506172839No Hit
CCCTTGTCCTTCGTCCATTTTCACCCCTCCAGAAATTTCGGTCATTGATT10.6172839506172839No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT10.6172839506172839No Hit
CAACAGTCTATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTA10.6172839506172839No Hit
ATATCTTGTTACTCTAAAATAATGCAGCAGGGCCCCTGGGTGGCTCAGTT10.6172839506172839No Hit
TGTAGGCTGCACACTGATCTGGCCTGCGGATGCCTTTTGTTGATTGGTAT10.6172839506172839No Hit
AAATAAAAAATAAAAAAAAAAAAAGAAAAAAAGAAAGAAAGAAATCAGGG10.6172839506172839No Hit
GGTAGCACGCTAAGTATTTTGAAAGCCTTAGATCATTTAATCCTCGTGGC10.6172839506172839No Hit
GCATGTACCATCTGCCTAGTCTGATTAGCAACCTCCATGGCCTCCGCTGC10.6172839506172839No Hit
GTCTGCGCTTCCTCTGACCTCTCCATTCTCACACTCTCTCTCTCAAATAA10.6172839506172839No Hit
GTGTGAGAATGGAGAGGTCAGAGGAAGCGCAGACTCCCCGCCGAACAGGG10.6172839506172839No Hit
GAAAGAAGTTGTACGAAGGTCAAAGAAGTTGTCCGTTCCAGCTTCCGTGG10.6172839506172839No Hit
CCGGAATGGATCCCAGAATGTGCTCTCTAATGCAAGGTTCAACACTTCCC10.6172839506172839No Hit
ACATTCACAAATGTGTTTGGGAAAAAAAGGGCCAATGTGGTGACAACTCC10.6172839506172839No Hit
TATCAGAACACCTGCCAGCACCAAATCCATCCATGCAAACTTCTCATCTG10.6172839506172839No Hit
TCCTTGGACAAGCGCCTCAAACTCATCCACCTCTGCCCCACCAACTTTGG10.6172839506172839No Hit
CTTGTGAGCTGGGTTTTCATTTGGTCTCATCAGGCTGACCACTTGGCTGT10.6172839506172839No Hit
TCTGGTGGGACTCCATCTCCAGACCCTGAGATCATGACCCGAGCTGCAGC10.6172839506172839No Hit
GTCCCAGGACTCCAGGATCATGACCTGAGCCAAAGGCAGTTGCTCAACCA10.6172839506172839No Hit
CATTGATACCAAAAAAATAGTGCTAAATATATATCTTAATTTATGTACCA10.6172839506172839No Hit
CATCAAGATACAGCAAGAAGTTCAAGCCGGAAATAGCAATAAGACCCAAA10.6172839506172839No Hit
TTTTTGTGGGGTCATCAAGATACAGCAAGAATTTCAAGCCGGAAATAGCA10.6172839506172839No Hit
TTTTCCAAGTGTCCAAGTACAGAGTTACCCAGGAACGCTGAATTTGCTGG10.6172839506172839No Hit
AGTTCAGACAATGGAACGTGTTACCCAGGAGATTTCATCGATTATGAGGA10.6172839506172839No Hit
GAAATGAGGGGCACCTGGGTGGCTCAGTTGGTTGAGCAACTGCCTTTGGC10.6172839506172839No Hit
GTGTCCTTACGAATCCACTGTACCGGCTTATGGTTGCCTTAGGGACAAGA10.6172839506172839No Hit
ATATCATGCATTAATGAAAAGTAATTGTCAGTACAAGTCCAACATAACGA10.6172839506172839No Hit
TTCCAGTTCCTTAGCAGGATCTTGAATAAGTGCATTGATAAGTTGAACTG10.6172839506172839No Hit
AAATAACATTCGAAGCAACTGGAAATCTAGTGGTACCGAGATATGCATTC10.6172839506172839No Hit
CCCCCAAAGGGGAATTCTTGAGGATGAACAGATGTACCAGAAGCTGTCTC10.6172839506172839No Hit
GACTTCTTTCCCTTTATCATTAATGTAGGATTTGCTGAGCTTTGGGTATG10.6172839506172839No Hit
CCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAG10.6172839506172839No Hit
CTACAGTGTAGAATATGTATTTAACATTAGGATTTCAGAAGCATGAGAAA10.6172839506172839No Hit
GAAAAGAGAAGAAGGGTGGAAAGAAGTTGTACGAAGGTCAAAGAAGTTGT10.6172839506172839No Hit
TATTAAATTTTTGTAGAAGCTTTTTGCTCCAGCATGAGGACATGCTGCCG10.6172839506172839No Hit
ACATCCAAATGTGCACTGAACTCAAACTCAGTGATTATGATGGACGACTA10.6172839506172839No Hit
ATCATGACTCTAACAAAGCATTAACGGAAGCATGTACTAATGCTGGAGCA10.6172839506172839No Hit
ATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGGCATTTTGGACAAAGC10.6172839506172839No Hit
ACTTAATACAACAAAAAATACTCAGATCAACCAAAATAAAACATACAAGA10.6172839506172839No Hit
ATCGAGAAGGGAGAATGAACTATTACTGGACACTAGTAGAGCCGGGAGAC10.6172839506172839No Hit
GAACAAAGGTGTAACGGCAGCATGTCCTCATGCTGGAGCAAAAAGCTTCT10.6172839506172839No Hit
ATATCCTCAAAGGAAAATTTCAAACAGCTGCCCAGAGGGCAATGATGGAT10.6172839506172839No Hit
CCAAAATACTCAGAGGAAGCAAAATTAAACAGAGAAGAAATAGATGGGGT10.6172839506172839No Hit
TCTTAAAGGATGTAATGGAATCAATGAACAAAGAGGAAATAGAGATAACA10.6172839506172839No Hit
CATTCCTGAAGTCTGCTTAAAATGGGAGCTAATGGATGATGATTATCGGG10.6172839506172839No Hit
CGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTATTTCCTCAA10.6172839506172839No Hit
GGAATGGAGTAGCAGTGACGGGTATCTCCTATCATTAGAGGAATTCACAT10.6172839506172839No Hit
GTATTCATCTACTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCT10.6172839506172839No Hit
TGGTCACTGTTCCCATCCTGTTGTATATGAGGCCCATGCAACTGGCAAGT10.6172839506172839No Hit
CTATCAAGAGTTGGAGAAACAATATATTGAGAACACAAGAGTCTGAATGT10.6172839506172839No Hit
GGGGAAAAATGTTGCCTGTTGAAACTTGGAGTCCCAACAGGAGCTGGCCC10.6172839506172839No Hit
CCTTTGTTCGAGTCATGATTGGGCCATGAACTTGTCTTGGGGAATATCTC10.6172839506172839No Hit
ATGCAAGGCAGCAATAGGGTTGAGGATTAGCTCATCTTTCAGTTTTGGTG10.6172839506172839No Hit
CATTTGGACTTACAATGCCGAACTGTTGGTTCTATTGGAAAATGAAAGAA10.6172839506172839No Hit
GCCAAGGAGGTGTCACTAAGCTATTCAACTGGTGCACTTGCCAGTTGCAT10.6172839506172839No Hit
TATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTA10.6172839506172839No Hit
CTCGGTCCCAGGACTCCAGGATCATGACCTGAGCCAAAGGCAGTTGCTCA10.6172839506172839No Hit
ATGATGGACGACTAATCCAGAATAGCATAACAATAGAGAGGATGGTGCTT10.6172839506172839No Hit
GTGCTATGGGGCATTCACCATCATCTACTAGTGCTGACCAACAAAGTCTC10.6172839506172839No Hit
GTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTT10.6172839506172839No Hit
GACACATTATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGA10.6172839506172839No Hit
GACCCAAAGTGAGGGGTCAAGAAGGGAGAATGAACTATTACTGGACACTA10.6172839506172839No Hit
GGTCACAGTCTGTGATAGGGAACCATCCAATGCATCAACAATTATCAGAC10.6172839506172839No Hit
ATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGTTA10.6172839506172839No Hit
ATTTTGTGCTTTTTACATATTATGGACATTTACCAATTGTGATCGGATGT10.6172839506172839No Hit
GCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCG10.6172839506172839No Hit
ATGACAAACACAACAATTAACAAATGACTTATGCTAATTAAATTATACTC10.6172839506172839No Hit
TTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGAATGTGGTGCTTATG10.6172839506172839No Hit
GACTGGGACAGACAATAACTTCTCAATAAAGCAAGATATCGTAGGAATAA10.6172839506172839No Hit
GACAATAACTTCTCAAGAAAGCAAGAGATCGTAGGAATAAATGATGGGTC10.6172839506172839No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)