FastQCFastQC Report
Fri 16 Feb 2024
HVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_D8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_D8d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCCCAGGGAGACT21.3793103448275863No Hit
GTTCTGCTATATACATTTGCAACCGCAAATGCAGACACATTATGTATAGG21.3793103448275863No Hit
GTCCAATCGCACGCAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGCA10.6896551724137931No Hit
GGGAAAGTACTATTGTCTCCCGAAGAAGTCAGTGAAACGCAAGGAACTGA10.6896551724137931No Hit
TTATTTCTCTTTTGAGCTTCTTGTATAGTTTAACTGCTCTATCCAAGTTG10.6896551724137931No Hit
CCATGGGGCCAAGGAGGTGTCACTAAGCTATTCAACTGGTGCACTTGCCA10.6896551724137931No Hit
ATCCAAACCAAAAGATAATAACCATTGGTTCGGTCTGTATGACAATTGGA10.6896551724137931No Hit
GGCCAAGGGTGTTGCCTCTTCCTTTTAAGGACTTTTGATCTCGGCGGAGC10.6896551724137931No Hit
TACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACGA10.6896551724137931No Hit
AAAATTAACAGAATAGATAATTTCAAACTAATAACAGCAAACTAAAGAAA10.6896551724137931No Hit
GTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCAGTTAGGGCA10.6896551724137931No Hit
GTACTGTGTCTACAGTGTCTGTTGAATTGTTCGCATGATAACCTATACAT10.6896551724137931No Hit
CTCTAGCTCTATGTCGACAAAATGACCATCGTCAACATCCACAGCACTCT10.6896551724137931No Hit
ATTCCTAAACTAATAACAAAAATACATAAAATCGAACCTTTCTCTCAATA10.6896551724137931No Hit
AGTTTGTCCTGATCTAAAATAACAACAATGCTGATGCTGATGAAAAAAAA10.6896551724137931No Hit
ATAAAGAGAACAATTTGCCCCAAAACCATAAATCAATAAATAGCCTATAA10.6896551724137931No Hit
AAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTATGGAT10.6896551724137931No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG10.6896551724137931No Hit
TAGCATAACAATAGAGAGGATGGTGCTTTCTGCTTTTGATGAGAGAAGAA10.6896551724137931No Hit
ATGATATCTGCAATCAAGCCACCTAAGCTTGAATAGCTGACAGCCCCTGC10.6896551724137931No Hit
GTATGTGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTG10.6896551724137931No Hit
AGCAGGTAGATATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACG10.6896551724137931No Hit
AGCGAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAGC10.6896551724137931No Hit
GGATAAGTTCTCTCATCCACTTTCCGTCTACTCTTCTATATATGGGTCCT10.6896551724137931No Hit
TCTTTTGCCTAGGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAGG10.6896551724137931No Hit
GTTTGGTGCATTCACTATGAGAGCAAAATCGTCGGATGATTGGAGCCCAT10.6896551724137931No Hit
GACTCGAACCGTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCACAA10.6896551724137931No Hit
ATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGGAGCTAATG10.6896551724137931No Hit
GTGTAAGAATCGGTTCCAAGGGGGATGTGTTTGTCATAAGGGAACCATTC10.6896551724137931No Hit
TTCTTTAGCTTTCAGGCCACTTTAGTTATATTCAGCTATTTAGTCAGTTT10.6896551724137931No Hit
AATGTGAAGAACTTATATGAAAAGGTAAGAAGCCAGCTAAAAAACAATGC10.6896551724137931No Hit
AGATTGAAGACCTCATTTTCCTGGCACGGTCAGCACTCATTCTGAGGGGA10.6896551724137931No Hit
CATATAGATAGATAGATCTATAATCTGGACAGTTAGGTTGCAACAGTTAT10.6896551724137931No Hit
GTTCCTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCCTATTA10.6896551724137931No Hit
ATCCCGTCTATTCAATCTAGAGGCCTATTTGGGGCCATTGCCGGTTTCAT10.6896551724137931No Hit
CGTCAGGCCCCCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTT10.6896551724137931No Hit
GATGCAGAGAGAGGCAAGTTAAAAAGAAGGGCTATCGCAACACCTGGGAT10.6896551724137931No Hit
GAACGATTCCTCTTGGGAATCCAGGAATGTGTAGTTGCAACGGCATCATA10.6896551724137931No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCC10.6896551724137931No Hit
TTTAAGGACTTTTGATCTCGGCGGAGCCGATCAAGGAATGGGGCATCACC10.6896551724137931No Hit
GGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAA10.6896551724137931No Hit
ATGCACGTGTTATCGCATTTGTGGTAAAATTCAAAGCAGCCGTTTCCAAT10.6896551724137931No Hit
GTTCTCCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT10.6896551724137931No Hit
GGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACT10.6896551724137931No Hit
GTTCAAGCTTTTCGCAAATGCTCCTAGCTAAAGTTTCAACAAAGTATACG10.6896551724137931No Hit
GGTAAAAGGGTTTTCATTCAAATACGGCAATGGTGTTTGGATAGGGAGAA10.6896551724137931No Hit
GCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCT10.6896551724137931No Hit
GTACTTAATACTTAAAACAATAAATCTTGAGATGGTAGAAAAGCTAACAA10.6896551724137931No Hit
CTCTTTGGGTCGCCCTCTGATTAGTTCAACCCAGAAGCAAGGTCTTATAC10.6896551724137931No Hit
GTGAGATAGCTAACAGGTAATCTCCAAAACAAGTCACAATATATACTTTA10.6896551724137931No Hit
TTTTTAAACTGCTTCCAGCTTTTACAAATCAGTTTTTGTTGCAGTAAAAA10.6896551724137931No Hit
AAGCTATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACA10.6896551724137931No Hit
CAATAAAATAAATGCAAATTTCAAAAACACCTGACCCTTTTGGAAATGTT10.6896551724137931No Hit
GAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATT10.6896551724137931No Hit
CTCCCTTCTTGACCCCTCACTTTGGGTCTTATTGCTATTTCCGGCTTGAA10.6896551724137931No Hit
ATCCTGACCACTCATTTATTCCTACGATATCTTGCTTTATTGAGAAGTTA10.6896551724137931No Hit
CAAAATAAAACTTTTAACATCTATAAATTAAGCAATAATAATTGTTAATA10.6896551724137931No Hit
GTCCCTAAGTGCCTGAACAATGAGAAGCAATTTTCTAGATTCAGCCGAAA10.6896551724137931No Hit
AAATGGAAGACTTTGTGCGACAATGCTTCAATCCAATGATCGTCGAGCTT10.6896551724137931No Hit
CTTGTATAGTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCAT10.6896551724137931No Hit
AGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACA10.6896551724137931No Hit
GCAAAAGCAGGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGGCG10.6896551724137931No Hit
TTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCG10.6896551724137931No Hit
AGACAATGGAACGTGTTACCCAGGAGATTTCATCGATTATGAGGAGCTAA10.6896551724137931No Hit
GGTTACAGCAGGGACATTACAGCCTCCTAAAATACCATCGAGCCCTTCAT10.6896551724137931No Hit
AGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGA10.6896551724137931No Hit
GAGAACAAGAGCGCTTGTTCGCACCGGAATGGATCCCAGAATGTGCTCTC10.6896551724137931No Hit
GTGATAGGTTGAATAAAAAAAACTTTAAACAAAAAAAACTGTCCAAATTC10.6896551724137931No Hit
CCACTAAAAATTCTACTTAAACCCTTACAAACAAAAAAAAAAAAACAATC10.6896551724137931No Hit
GAAAAGAGGGCCTTCTACGGAAGGAGTGCCTGAGTCCATGAGGGAAGAAT10.6896551724137931No Hit
CTGTATATTTTCAGAGACTCGAACCGTGTTACCATTCCATTCAAGTCCTC10.6896551724137931No Hit
AGATTGAATAGACGGGATATTCCTCAATCCTGTGGCCAGTCTCAATTTTG10.6896551724137931No Hit
AACAAATACATACCATAAAGATTTTACCCAATTAAATACAAACACATGTA10.6896551724137931No Hit
GGTGAAAATGGACGAAGGACAAGGGTTGCTTATGAAAGAATGTGCAATAT10.6896551724137931No Hit
AGGGAGAAGCAGGTTCCCTGCTCAGCAAGGAGCCCAGTGCAGGGGTTGAT10.6896551724137931No Hit
TGCCAGGAAAATGAGGTCTTCAATCTCAGCGTTTCCTGGGTTTCGACTTT10.6896551724137931No Hit
GAGAAAAAAGCTCACGAATCACCAGAGACACAGATGTGATTCTGCATCCC10.6896551724137931No Hit
TATTTGGACAGTGTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACA10.6896551724137931No Hit
ATTATTTCCTGCATACCTGATGCCAGAATCAGCTAGACCACATTGCCAAT10.6896551724137931No Hit
CAATAGGACAGCTCATTAGGGTTCGATATGGGCTCCTGTCTTTAATGGTT10.6896551724137931No Hit
ATGTTGTTCGGGTCCCCATTCCCATTTAGGGCATTTTGGACAAAGCGTCT10.6896551724137931No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGT10.6896551724137931No Hit
CAATAAATATTATAATTAACAAAAGAAAAAAAAAGGAACACAATAATGGA10.6896551724137931No Hit
CCCCCAGGGAGACTACCAGTACCAATGAACTGGCGACAGTTGAATAGATC10.6896551724137931No Hit
CTTCCTTTTAACTTGCCTCTCTCTGCATCTTTGGTCATCGTATTTAATGT10.6896551724137931No Hit
GGATAACAGGAGCATTCCTCATAGTGATAATTAGGGGCATTCATTTCGAC10.6896551724137931No Hit
ACCCAAGGGACGTGCTGGGAGCAGATGTACACTCCAGGAGGAGAAGTGAG10.6896551724137931No Hit
CACAAAAAAACCATAAAAAGCCAACAGGACCAGACAAAAATACAAATATC10.6896551724137931No Hit
GAGGGAGTACAAGCAGGAGTGGACAGATTCTACAGGACCTGCAAGTTAGT10.6896551724137931No Hit
CTCTTAGTTTGCATAGTTTCCCGTTATGCTTGTCTTCTAGAAGGTTAACA10.6896551724137931No Hit
GCTGTTCCTGTTGATATTCTTCTCTCATGGACTCAGGCACTCCTTCCGTA10.6896551724137931No Hit
GTGGTGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAA10.6896551724137931No Hit
ATCAAATGTATCATACCCCCAAACCAGAGATAATCACAAAAACCAAAAAG10.6896551724137931No Hit
TATCAATGTTAAAAATCGTATTTCTAATATTCTAATTTATTATAAATCAA10.6896551724137931No Hit
ATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTCCC10.6896551724137931No Hit
CTAGTAGAGCCGGGAGACAAAATAACATTCGAAGCAACTGGAAATCTAGT10.6896551724137931No Hit
TTACTCTGGACAGTTAGGTGGGAACAGTTTTCTCAGGGAAGGACTACACG10.6896551724137931No Hit
AGATAATTGAAGGAAGAGACCGAATCATGGCCTGGACAGTGGTGAACAGT10.6896551724137931No Hit
GCCATAGCCTCTAGAACACAGTCTGTTTGTGCATACCCACTTGGTTCATT10.6896551724137931No Hit
CTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCT10.6896551724137931No Hit
ATGGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAG10.6896551724137931No Hit
CGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATAAGCATGATG10.6896551724137931No Hit
GGCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACA10.6896551724137931No Hit
GCAAAGATACTACAAAATTATTTCCTGCATACCTGATGCCAGAATCAGCT10.6896551724137931No Hit
AGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATT10.6896551724137931No Hit
AGTAAGACCTGCTGTTGCATCTTCGCCATTGTTTGCTTGGCGCCAAACTC10.6896551724137931No Hit
GGACCAGATTGCTTCAAATGAGAATGTGGAAACCATGGACTCCAATACCC10.6896551724137931No Hit
GTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAG10.6896551724137931No Hit
CAGTAAAGACAACAGTGTAAGAATCGGTTCCAAGGGGGATGTGTTTGTCA10.6896551724137931No Hit
ACCCAAGGGTGCTATAAACACCAGCCTCCCATTTCAGAATATACATCCGA10.6896551724137931No Hit
GCCCAATCATGAATCGAACAAAGGTGTAACGGCAGCATGTCCTCATGCTG10.6896551724137931No Hit
CTCCAATACTCATGTCAGCTGATTCATTTACTCCAGACACTCCAAAGCTG10.6896551724137931No Hit
TCTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTC10.6896551724137931No Hit
CCTTTTATTTATTTTTGTCTCATTGGTGGACATCCTTATTTTATTCCTGA10.6896551724137931No Hit
GTTGAATAGCTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTCT10.6896551724137931No Hit
AAGAAGTCCTATATAAATAAGACAGGAACATTTGAATTCACAAGCTTTTT10.6896551724137931No Hit
TTAAAAAACATTAAGAAACTTACTAACTGACAAAAATAACATAATACAAA10.6896551724137931No Hit
GAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA10.6896551724137931No Hit
GAGTAACAGTGATAAAGAACAACATGATAAACAATGACCTTGGACCTGCA10.6896551724137931No Hit
GTGGCTGTTTCGATATCGAGGCCAAGGGTGTTGCCTCTTCCTTTTAAGGA10.6896551724137931No Hit
GTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCCTATTA10.6896551724137931No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC10.6896551724137931No Hit
GGATAAATAAGTCTAATAAATATATTCACGTGAACACACACACATATGAA10.6896551724137931No Hit
GTATTCATCTACTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCT10.6896551724137931No Hit
CATTCTGAGGGGATCAGTTGCACATAAATCCTGCCTGCCTGCTTGTGTGT10.6896551724137931No Hit
CACTCCTTCCGTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGCGACGAT10.6896551724137931No Hit
CAGGGCCATTGATCTCCCACATCATTGATGACGAATAAGTTATTGTCAAC10.6896551724137931No Hit
CGCCAAACTCTCCTTATTTCTTCTTTGTCATAAAGGATGAGTTCTCTCAT10.6896551724137931No Hit
CTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCCCAG10.6896551724137931No Hit
GTATCCTCAACCCTGATCCTCATCGTTTGTTTTGCTCCAGAGGGTTTGTC10.6896551724137931No Hit
CTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCA10.6896551724137931No Hit
AAATAGAGGTTTGCATTAACTGAGACATCTGAGTCTTACACATTCATTAT10.6896551724137931No Hit
ATGATGGACGACTAATCCAGAATAGCATAACAATAGAGAGGATGGTGCTT10.6896551724137931No Hit
GTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGTCTGATTAGCAAC10.6896551724137931No Hit
GACCATGGGCTGGCATTACCACAGCATTGTTTACAGAATCAATCTCTTTA10.6896551724137931No Hit
ACAGTGATGAGCCAGAGCCCAGATCTCTAGCAAGCTGGGTCCAAAATGAA10.6896551724137931No Hit
GGCCCCCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGG10.6896551724137931No Hit
CTTCTTGCTGTATCTTGATGACCCCACAAAAACATATGCATCTGCATTCT10.6896551724137931No Hit
CCTCAAATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTCTGCTCTGG10.6896551724137931No Hit
CAGATTTTGCCAGTAAGGTCCTGCACACTTTCCCAATAGAGCCTTCCTCC10.6896551724137931No Hit
CCCATCAACAGATGAATGGATAAAGATGTGGCATATATATATGCACTGTC10.6896551724137931No Hit
AGAAGGGAAAACAAAAGCAACAAAAATGAAGGCAATACAAGTAGTTCTGC10.6896551724137931No Hit
GTGGTCAGCCTGATGAGACCAAATGAAAACCCAGCTCACAAGAGTCAATT10.6896551724137931No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)