FastQCFastQC Report
Fri 16 Feb 2024
HVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_C8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n01_CIVIR_Ferret_Flu_R2_C8d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATAGAAGTCTTTAGATCGAATGGCCTAACAGCTAATGAGTCAGGAAGG21.2269938650306749No Hit
ATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTC10.6134969325153374No Hit
AGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAATACAAGAGA10.6134969325153374No Hit
ATATACATCCGATCACAATTGGAAAATGTCCAAAATATGTAAAAAGCACA10.6134969325153374No Hit
CTTTCTGACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCAT10.6134969325153374No Hit
CTCATGGACTCAGGCACTCCTTCCGTAGAAGGCCCTCTTTTCAAACCGTA10.6134969325153374No Hit
ATATGGGTCCTCCTGTTTTCTTAGGGTCCTTCCCAGCACTGGGATGCTCT10.6134969325153374No Hit
ATCCAATGATCGTCGAGCTTGCGGGAAAGACATGACCAAGGAATTCTTTG10.6134969325153374No Hit
ATTCGAGCCATGCCAGTTATCCCTGCACACACATGTGATTTCACGAGAAT10.6134969325153374No Hit
GTAGACGGAAAGTGGATGAGAGAACTCATCCTTTATGACAAAGAAGAAAT10.6134969325153374No Hit
TATGTGGACTTCCCTCCGTGTTACTCCAATTTCAATGAACCGGTTCTCTT10.6134969325153374No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG10.6134969325153374No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCAT10.6134969325153374No Hit
ATCCACTAATCAGGCATGAAAACAGAATGGTGCTGGCTAGCACTACGGCA10.6134969325153374No Hit
TACGATATCTTGCTTTATTGAGAAGTTATTGTCTGTCCCAGTCCATCCGT10.6134969325153374No Hit
CCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCCTAAA10.6134969325153374No Hit
CTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCC10.6134969325153374No Hit
TCTGATACTAATAGCCCTACCTTTGATTGGGTTTGATCCCACAGCTTCTT10.6134969325153374No Hit
TGGGTCAAGTAAGAGAAAGTCGAAACCCAGGAAACGCTGAGATTGAAGAC10.6134969325153374No Hit
ATTTAGGGCATTTTGGACAAAGCGTCTACGCTGCAGTCCTCGCTCACTGG10.6134969325153374No Hit
GCTCTACTAGTGTCCAGTAATAGTTCATTCTCCCTTCTTGATTCCTCACT10.6134969325153374No Hit
CAGTGTCACTGTTTACACCACAAAAGGATATGCTGCTCCCGCTAGTCCAG10.6134969325153374No Hit
TAGTAGAAACAAGGAGTTTTTTGAACAAATTACTTGTCAATGGTAAATGG10.6134969325153374No Hit
TTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGCTTTCTCGTTTCA10.6134969325153374No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCA10.6134969325153374No Hit
GTGGAAACCATGGACTCCAATACCCTGGAACCTGTCTCTTATACACATCT10.6134969325153374No Hit
ACACTAAAATAAAACACAATAGAAAAAATCAAAACAGAAGATCAAATTGT10.6134969325153374No Hit
GAATCAGGATAACAGGAGCATTCCTCATAGTGATAATTAGGGGCATTCAT10.6134969325153374No Hit
GTTCTTGTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCCTATTA10.6134969325153374No Hit
ATCCCGACCAGTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTTGCTAC10.6134969325153374No Hit
TAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTA10.6134969325153374No Hit
GAGCAATTCGGACATAAATATGAGGAAATAAGGTTTTTAAATGAAGAAAT10.6134969325153374No Hit
AATATATTGAGAACACAAGAGTCTGAATGTGCATGTGTAAATGGTTCTTG10.6134969325153374No Hit
GAGCAAAAGCAGGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGG10.6134969325153374No Hit
ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGT10.6134969325153374No Hit
GGTCGGGATAGACCCATTCAAATTACTCCAAAACAGCCAAGTGGTCAGCC10.6134969325153374No Hit
TCATAATCGATGAAATCTCCTGGGTAACACGTTCCATTGTCTGAACTAGG10.6134969325153374No Hit
GGATTGAGGAATATCCCGTCTATTCAATCTAGAGGCCTATTTGGGGCCAT10.6134969325153374No Hit
CATTAGATCTCTCAGTTCTTTTATTCTCTCCATATTGAATATATTTGACC10.6134969325153374No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT10.6134969325153374No Hit
CCAATCATCCGACGATTTTGCTCTCATAGTGAATGCACCAAACCATGAGG10.6134969325153374No Hit
CTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCG10.6134969325153374No Hit
ATCCACAGCACTCTGCTGTTCCTGTTGATATTCTTCCCTCATGGACTCAG10.6134969325153374No Hit
GAGCAAAAGCAGGAGTGGACAGATTCTACAGGACCTGCAAGTTAGTGGGA10.6134969325153374No Hit
AATTACAGCAGACAAGAGAATAATGGAGCAATCTTGCAAAAGGAGAGAAG10.6134969325153374No Hit
GCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTAG10.6134969325153374No Hit
TTCCAGCTTTACCCCATCTATTTCTTCTCTGTTTAATTTTGCTTCCTCTG10.6134969325153374No Hit
ATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATC10.6134969325153374No Hit
CAACTAGGAATGCTACTGATATCCTGATACTATTTAAAAAAAATGTCAAA10.6134969325153374No Hit
GTATTCCGATCATTCCCATCACATTGTCGATGGATTCAATTCCCCAGTTC10.6134969325153374No Hit
CTATTTCCTCTTTGTTCATTGATTCCATTACATCCTTTAAGAAATCTATT10.6134969325153374No Hit
GAACTAAAAGCATTAGTTCAAGAAACGGTTTTGAGATGATTTGGGATCCG10.6134969325153374No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA10.6134969325153374No Hit
CAATAACACGTCATATAGAGCAATAACCCTCAAAATTAACTGAAAACACT10.6134969325153374No Hit
GCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGAC10.6134969325153374No Hit
ACTTGAATCGCTGCATCTGCACTCCCATTCGCTTCTGGTAGGCCTGCAAA10.6134969325153374No Hit
GTATTGCTACCGAGCGGTATAACTTCCCGCTCATTCGCACTGAGACCATT10.6134969325153374No Hit
CCTCTGCGCCGTGCCTAGCTGAGTCGAATGAAGAGATGCAACACTTCTAC10.6134969325153374No Hit
CATATGCAGTGGGATTTTCGGAGACAATCCACGCCCTAATGATAAGACAG10.6134969325153374No Hit
GAGATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA10.6134969325153374No Hit
CTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTCCAA10.6134969325153374No Hit
CTTGTATAGTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCAT10.6134969325153374No Hit
AGCTCTATGTTGACAAAAAGACCATCGTAAACATCAAAAGCAATCTTCTG10.6134969325153374No Hit
GTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGT10.6134969325153374No Hit
CTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCA10.6134969325153374No Hit
GTCGACTTCGAGTCTGGACGGATCAAGAAAGAAGAGTTCTCTGAGATCAT10.6134969325153374No Hit
CAGTAACACACTCTGTTAACCTTCTAGAAGACAAGCATAACGGGAAACTA10.6134969325153374No Hit
GCTCTATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGGCATTTTGGAC10.6134969325153374No Hit
GATATATGTAATCATCGCCAGGAACATTCGAGGATTTTGATTTTCATTCC10.6134969325153374No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG10.6134969325153374No Hit
CAGTTGAATAGCTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCT10.6134969325153374No Hit
GTGCTGGGAAGGACCCTAAGAAAACAGGAGGACCCATATATAGAAGAGTA10.6134969325153374No Hit
AATTACTTGTCAATGGTAAATGGCAACTCAGCACCGTCTGGCCAAGACCA10.6134969325153374No Hit
TTGCAGGTCCAAGGTCATTGTTTATCATGTTGTTCTTTATCACTGTTACT10.6134969325153374No Hit
AGATTGAATAGACGGGATATTCCTCAATCCTGTGGCCAGTCTCAATTTTG10.6134969325153374No Hit
CAAAAAACAATAGGGAAGAAAAAACAAAGACTGAATAAGAGAGGCTATAT10.6134969325153374No Hit
ACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAG10.6134969325153374No Hit
AAATTGAAAAATAAAGAAAAGACAAAATTATAAAATCTGTTCACACTCAC10.6134969325153374No Hit
GTAGATAATCACTCAATGAGTGACATCGAAGCCATGGCGTCTCAAGGCAC10.6134969325153374No Hit
TACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGATTTCACGTTTCAG10.6134969325153374No Hit
GCAATATCCTCAAANGAAAATTTCAAACAGCTGCCCAGAGGGCAATGATG10.6134969325153374No Hit
GGCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGG10.6134969325153374No Hit
CCATCTACCATCCCTGTCCACCCCCCTTCAATGAAAACGGCAATGGCCCC10.6134969325153374No Hit
GACCGAAATTTCTGGAGGGGTGAAAATGGACGAAGGACAAGGGTTGCTTA10.6134969325153374No Hit
CTGAGAAGCAGATACTGGGCCATAAGGACCAGGAGTGGAGGAAATACCAA10.6134969325153374No Hit
AACTAAGAGGGGTAGCCCCATTGCATTTGGGTAAATGTAACATTGCTGGC10.6134969325153374No Hit
CAAACAAACAGGCAGGCAGTAATTATGAGCAACTGATCCACTAAGAAAGA10.6134969325153374No Hit
GTATTTAAAGCGACGATAAATACATTTGAAAAAAAGACGATCAGTAATCC10.6134969325153374No Hit
CTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACC10.6134969325153374No Hit
GATATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATT10.6134969325153374No Hit
TTTTCCAATAGAACCAACAGTTCGGCATTGTAAGTCCAAATGTCCAGGAA10.6134969325153374No Hit
GCTGAAACGAGAAAGCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTGT10.6134969325153374No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA10.6134969325153374No Hit
CTAAATAAAACAAAAAATATCATTCACACAAATACTACACAACATCTTTT10.6134969325153374No Hit
TTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAATCCAGCGAGACA10.6134969325153374No Hit
TCTATATATGGGTCCTCCTGTTTTCTTAGGGTCCTTCCCAGCACTGGGAT10.6134969325153374No Hit
CTTCAATGGTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTG10.6134969325153374No Hit
ATTCATATCATGCTCACCCTTGGAATGCAGAACCTGCTTCTTGACTCAAG10.6134969325153374No Hit
TAACAAAAATATATAAAACTTTCTTAAAATAAAAACCAACAAATGTCAAC10.6134969325153374No Hit
GTCTTATACAATCCAGCCCTGTTAGTTCTGGATGCTGAACAAAACTCCCG10.6134969325153374No Hit
GGGTAGCCCCATTGCATTTGGGTAAATGTAACATTGCTGGCTGGATCCTG10.6134969325153374No Hit
CTTCTAATAGATGGCACAGCATCACTGAGTCCTGGGATGATGATGGGCAT10.6134969325153374No Hit
GAGTGTGTTACTGTTACATTCTTTTCTAGTACTGTGTCTACAGTGTCTGT10.6134969325153374No Hit
GCCTCATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGT10.6134969325153374No Hit
CAATGTAGGACCATGAGCTTGCTGTGGAGAGTGATTCACACTCTGGATTT10.6134969325153374No Hit
CCGATGCTGTGAATCAGCAATCTGTTCACAAGTGGCACACACTAGACCAA10.6134969325153374No Hit
ATTCTGAGGGGATCAGTTGCACATAAATCCTGCCTGCCTGCTTGTGTGTA10.6134969325153374No Hit
TGCCCATCATCATCCCAGGACTCAGTGATGCTGTGCCATCTATTAGAAGA10.6134969325153374No Hit
CCACCAATCCACTAATCAGGCATGAAAACAGAATGGTGCTGGCTAGCACT10.6134969325153374No Hit
CTGGAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTGCCT10.6134969325153374No Hit
TAAGACAAGAAATGGCCAGTAGGAGTCTATGGGATTCCTTTCGTCAGTCC10.6134969325153374No Hit
ACGCAAAGAACAATAGGGAAGAAAAAACAAAGACTGAATAAGAGAGGCTA10.6134969325153374No Hit
TACTAATCTGTAATAATTAAAAATACATATTAATAAACAATTAAGGTATT10.6134969325153374No Hit
ACACTACAAATACACAAATACTTTCAATAGGACAGAAACACAAATTAAGA10.6134969325153374No Hit
GGGTATTGGAGTCCATGGTTTCCACATTCTCATTTGAAGCAATCTGGACC10.6134969325153374No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGA10.6134969325153374No Hit
CCCCTGAAACCCTTTGTCAGTCATAAAGAGATTTATTCTGTAAACAATGC10.6134969325153374No Hit
CCTTAAATCTTCAATCAAAAAAAATATACCATCTATACTCCAAATAATCA10.6134969325153374No Hit
CTGTAGACACAGTACTAGAAAAGAATGTAACAGTAACACAAACTGATAAA10.6134969325153374No Hit
GAGTAACAGTGATAAAGAACAACATGATAAACAATGACCTTGGACCTGCA10.6134969325153374No Hit
GAAGATGGTCACGCAAAGAACAATAGGGAAGAAAAAACAAAGACTGAATA10.6134969325153374No Hit
AGAAAGCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTGTAAGGCTTGC10.6134969325153374No Hit
GGATTACTGATCGTCTTTTTTTCAAATGTATTTATCGTCGCTTTAAATAC10.6134969325153374No Hit
TTCTTCCGACAGATGCTCTGATTTCTGTGGCATCCTGGCGCTCCCCACCA10.6134969325153374No Hit
AGGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAG10.6134969325153374No Hit
TAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCCATTTAGGGCATTT10.6134969325153374No Hit
GTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCCTATTA10.6134969325153374No Hit
GCTGTGGAGAGTGATTCACACTCTGGATTTCCCAGGATCCAGCCAGCAAT10.6134969325153374No Hit
GTTCCAACTCCTTTCACCGCAGCACCTGCGGCACCAGACCTTCTGGGAAG10.6134969325153374No Hit
CTCCTTCCGTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGCGACGATAA10.6134969325153374No Hit
GAACAAAGGTGTAACGGCAGCATGTCCTCATGCTGGAGCAAAAAGCTTCT10.6134969325153374No Hit
GTACTATTGTCTCCCGAAGAAGTCAGTGAAACGCAAGGAACTGAGAAGTT10.6134969325153374No Hit
AAGAGGGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCTGT10.6134969325153374No Hit
CCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCG10.6134969325153374No Hit
CATGTAAGGATTTAAAAAATGAAAATACTAAAAAAATATTCACACACTCT10.6134969325153374No Hit
CTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATC10.6134969325153374No Hit
GGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGAC10.6134969325153374No Hit
CGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTATTTCCTCAA10.6134969325153374No Hit
ATTCAGGTTGGAATGCCAAATCATGATATGAGTAAGACCTGCTGTTGCAT10.6134969325153374No Hit
GATAATAGGCCCTCTTTGCGTGCGATTTTACCAGGCGATCATGGAAAAGA10.6134969325153374No Hit
GTAATATAGAAGCTTAACATATTAATTTACAGAAAAATTCTATACAAGTA10.6134969325153374No Hit
CTGGAAAGTGTCTTTGCAGGAAAGAACACATATCTTGAGGCTCTCATGGA10.6134969325153374No Hit
GGTAAGAAGCCAGCTAAAAAACAATGCCAAGGAAATTGGAAACGGCTGCT10.6134969325153374No Hit
TCATACCCACTTGCTACTGCAAGCCCATACACACAAGCAGGCAGGCAGGA10.6134969325153374No Hit
GGCTAGATCGAGTGAACAGGCAGCGGAGGCCATGGAGGTAGCTAATCAGA10.6134969325153374No Hit
GCTATAAACAATTGCAACAGCAAAAGAACACACAATATTTAAACATTAAC10.6134969325153374No Hit
TGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATC10.6134969325153374No Hit
TCTCTACAGCGCCCGAGTTTCAGTTTATACCCAAGCATAAATCCAACGCA10.6134969325153374No Hit
GGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCT10.6134969325153374No Hit
GCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGC10.6134969325153374No Hit
CATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGCC10.6134969325153374No Hit
GAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGGAGGTTGC10.6134969325153374No Hit
CCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTCCCTCCTC10.6134969325153374No Hit
ATCTTGATGACCCCACAAAAACATATGCATCTGCATTCTGATAGAGACTT10.6134969325153374No Hit
CCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAA10.6134969325153374No Hit
GACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAG10.6134969325153374No Hit
ACCTACTGCTGTGAACTGTGTATTCATCTTTTCAATAACAGAATTTACTT10.6134969325153374No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG10.6134969325153374No Hit
TTCCAACCGGTCTCCTATATGAACTTCTATGGAAAAATTACTCGAAAAGA10.6134969325153374No Hit
CGACCAGTGGGTACCCTTCCCTTTCAAAGTCATGCCCACTTGCTACTGCA10.6134969325153374No Hit
GGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCT10.6134969325153374No Hit
GCTCCCGCTAGTCCAGATTGTGTTCTCTTTGGGTCGCCCTCTGATTAGTT10.6134969325153374No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)