FastQCFastQC Report
Tue 6 Feb 2024
HVLTFDRX3_n01_CIVIR_Ferret_Flu_R1_E8b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVLTFDRX3_n01_CIVIR_Ferret_Flu_R1_E8b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCAATTTTGTGCTTTTTACATATTTTGGACATTTTCCAATTGTGATC120.0No Hit
ATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATT120.0No Hit
GGTGGGGAGCGCCAGGATGCCACAGAAATCAGAGCATCTGTCGGAAGAAT120.0No Hit
TAGCACTTCTTCTTCTTTCTTGACTGATGATCCGCTTGTCCTTTTGAAAG120.0No Hit
CCCTTCGACTCGATATAGACACAGCCACACTTGTTCCGAAACAAAAACTG120.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)