Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HVKNTDMXY_n01_CITE-seq_test2_BCells_AC_R1 HVKNTDMXY_n01_CITE-seq_test2_BCells_AC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 119219912.0 0.0 26.0 51.0 5.6067045983412855 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_BCells_AF_R1 HVKNTDMXY_n01_CITE-seq_test2_BCells_AF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 327694332.0 0.0 26.0 52.0 4.601336936029717 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_BCells_SC_R1 HVKNTDMXY_n01_CITE-seq_test2_BCells_SC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 18026.0 0.0 26.0 53.0 73.01675357816487 26.0 pass pass fail pass fail warn pass pass pass warn pass HVKNTDMXY_n01_CITE-seq_test2_BCells_SF_R1 HVKNTDMXY_n01_CITE-seq_test2_BCells_SF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 156745935.0 0.0 26.0 52.0 8.09109469343551 26.0 pass pass pass pass warn pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_GEX_AC_R1 HVKNTDMXY_n01_CITE-seq_test2_GEX_AC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 339938638.0 0.0 26.0 52.0 9.973945978323222 26.0 pass pass pass pass pass pass pass pass fail warn pass HVKNTDMXY_n01_CITE-seq_test2_GEX_AF_R1 HVKNTDMXY_n01_CITE-seq_test2_GEX_AF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 506891752.0 0.0 26.0 52.0 10.25058237324512 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_GEX_SC_R1 HVKNTDMXY_n01_CITE-seq_test2_GEX_SC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 425093806.0 0.0 26.0 52.0 11.440387548412865 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_GEX_SF_R1 HVKNTDMXY_n01_CITE-seq_test2_GEX_SF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 470207629.0 0.0 26.0 52.0 15.65656595379876 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_TCells_AC_R1 HVKNTDMXY_n01_CITE-seq_test2_TCells_AC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 145192170.0 0.0 26.0 52.0 3.060735102752816 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_TCells_AF_R1 HVKNTDMXY_n01_CITE-seq_test2_TCells_AF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 203150177.0 0.0 26.0 52.0 3.3906669462641292 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_CITE-seq_test2_TCells_SC_R1 HVKNTDMXY_n01_CITE-seq_test2_TCells_SC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 183990046.0 0.0 26.0 51.0 4.4863236192073055 26.0 pass pass pass pass pass pass pass pass fail warn pass HVKNTDMXY_n01_CITE-seq_test2_TCells_SF_R1 HVKNTDMXY_n01_CITE-seq_test2_TCells_SF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 203055496.0 0.0 26.0 52.0 5.310731173448147 26.0 pass pass pass pass pass pass pass pass fail pass pass HVKNTDMXY_n01_undetermined HVKNTDMXY_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 257575558.0 0.0 26.0 48.0 43.71195629260488 26.0 pass pass pass pass pass warn pass pass fail pass pass HVKNTDMXY_n02_CITE-seq_test2_BCells_AC_R1 HVKNTDMXY_n02_CITE-seq_test2_BCells_AC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 119219912.0 0.0 90.0 55.0 17.2183042593322 90.0 pass pass pass pass warn warn pass pass fail fail fail HVKNTDMXY_n02_CITE-seq_test2_BCells_AF_R1 HVKNTDMXY_n02_CITE-seq_test2_BCells_AF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 327694332.0 0.0 90.0 55.0 15.14678190508879 90.0 pass pass pass pass pass fail pass pass fail fail fail HVKNTDMXY_n02_CITE-seq_test2_BCells_SC_R1 HVKNTDMXY_n02_CITE-seq_test2_BCells_SC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 18026.0 0.0 90.0 54.0 69.79363142128038 90.0 pass pass fail pass warn warn pass pass warn fail fail HVKNTDMXY_n02_CITE-seq_test2_BCells_SF_R1 HVKNTDMXY_n02_CITE-seq_test2_BCells_SF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 156745935.0 0.0 90.0 54.0 18.3171892437964 90.0 pass pass pass pass pass fail pass pass fail fail fail HVKNTDMXY_n02_CITE-seq_test2_GEX_AC_R1 HVKNTDMXY_n02_CITE-seq_test2_GEX_AC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 339938638.0 0.0 90.0 49.0 16.337959190821564 90.0 pass pass pass pass warn pass pass pass fail fail pass HVKNTDMXY_n02_CITE-seq_test2_GEX_AF_R1 HVKNTDMXY_n02_CITE-seq_test2_GEX_AF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 506891752.0 0.0 90.0 50.0 17.293897388012304 90.0 pass pass pass pass warn pass pass pass fail fail pass HVKNTDMXY_n02_CITE-seq_test2_GEX_SC_R1 HVKNTDMXY_n02_CITE-seq_test2_GEX_SC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 425093806.0 0.0 90.0 49.0 15.902202283661616 90.0 pass pass pass pass warn pass pass pass fail fail pass HVKNTDMXY_n02_CITE-seq_test2_GEX_SF_R1 HVKNTDMXY_n02_CITE-seq_test2_GEX_SF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 470207629.0 0.0 90.0 50.0 18.49788049459117 90.0 pass pass pass pass warn pass pass pass fail fail pass HVKNTDMXY_n02_CITE-seq_test2_TCells_AC_R1 HVKNTDMXY_n02_CITE-seq_test2_TCells_AC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 145192170.0 0.0 90.0 53.0 11.153041469807414 90.0 pass pass pass pass fail warn pass pass fail fail fail HVKNTDMXY_n02_CITE-seq_test2_TCells_AF_R1 HVKNTDMXY_n02_CITE-seq_test2_TCells_AF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 203150177.0 0.0 90.0 53.0 10.954981767583039 90.0 pass pass pass pass fail fail pass pass fail fail fail HVKNTDMXY_n02_CITE-seq_test2_TCells_SC_R1 HVKNTDMXY_n02_CITE-seq_test2_TCells_SC_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 183990046.0 0.0 90.0 53.0 17.275480372223686 90.0 pass pass pass pass warn warn pass pass fail fail fail HVKNTDMXY_n02_CITE-seq_test2_TCells_SF_R1 HVKNTDMXY_n02_CITE-seq_test2_TCells_SF_R1.fastq.gz Conventional base calls Sanger / Illumina 1.9 203055496.0 0.0 90.0 53.0 15.828018080445243 90.0 pass pass pass pass warn fail pass pass fail fail fail HVKNTDMXY_n02_undetermined HVKNTDMXY_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 257575558.0 0.0 90.0 48.0 41.486307185496 90.0 pass pass pass pass warn pass pass pass fail fail warn