[2024-05-23 18:28:57,661] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-05-23 18:28:57,661] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-05-23 18:28:57,661] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-05-23 18:28:57,664] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-05-23 18:28:57,664] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-05-23 18:28:57,664] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-05-23 18:28:57,698] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-05-23 18:28:57,698] multiqc [INFO ] This is MultiQC v1.9 [2024-05-23 18:28:57,698] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-05-23 18:28:57,698] multiqc [DEBUG ] Working dir : /vast/gencore/GENEFLOW/work/e3/4ca11f4734bd7f08fdbff6eb1efd35/merged [2024-05-23 18:28:57,698] multiqc [INFO ] Template : default [2024-05-23 18:28:57,698] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-05-23 18:28:57,698] multiqc [INFO ] Searching : /vast/gencore/GENEFLOW/work/e3/4ca11f4734bd7f08fdbff6eb1efd35/merged [2024-05-23 18:28:57,699] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-05-23 18:28:57,699] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-46942794/tmpkwj_9nqa [2024-05-23 18:28:57,826] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_AC_R1_fastqc.html [2024-05-23 18:28:57,835] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_AC_R1_fastqc.html [2024-05-23 18:28:57,910] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_AF_R1_fastqc.html [2024-05-23 18:28:57,917] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_AF_R1_fastqc.html [2024-05-23 18:28:57,988] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_SC_R1_fastqc.html [2024-05-23 18:28:57,998] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_SC_R1_fastqc.html [2024-05-23 18:28:58,076] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_SF_R1_fastqc.html [2024-05-23 18:28:58,083] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_BCells_SF_R1_fastqc.html [2024-05-23 18:28:58,156] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_AC_R1_fastqc.html [2024-05-23 18:28:58,166] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_AC_R1_fastqc.html [2024-05-23 18:28:58,238] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_AF_R1_fastqc.html [2024-05-23 18:28:58,246] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_AF_R1_fastqc.html [2024-05-23 18:28:58,315] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_SC_R1_fastqc.html [2024-05-23 18:28:58,323] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_SC_R1_fastqc.html [2024-05-23 18:28:58,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_SF_R1_fastqc.html [2024-05-23 18:28:58,405] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_GEX_SF_R1_fastqc.html [2024-05-23 18:28:58,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_AC_R1_fastqc.html [2024-05-23 18:28:58,485] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_AC_R1_fastqc.html [2024-05-23 18:28:58,559] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_AF_R1_fastqc.html [2024-05-23 18:28:58,566] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_AF_R1_fastqc.html [2024-05-23 18:28:58,634] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_SC_R1_fastqc.html [2024-05-23 18:28:58,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_SC_R1_fastqc.html [2024-05-23 18:28:58,713] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_SF_R1_fastqc.html [2024-05-23 18:28:58,723] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_CITE-seq_test2_TCells_SF_R1_fastqc.html [2024-05-23 18:28:58,797] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n01_undetermined_fastqc.html [2024-05-23 18:28:58,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n01_undetermined_fastqc.html [2024-05-23 18:28:58,881] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_AC_R1_fastqc.html [2024-05-23 18:28:58,890] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_AC_R1_fastqc.html [2024-05-23 18:28:58,963] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_AF_R1_fastqc.html [2024-05-23 18:28:58,972] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_AF_R1_fastqc.html [2024-05-23 18:28:59,044] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_SC_R1_fastqc.html [2024-05-23 18:28:59,051] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_SC_R1_fastqc.html [2024-05-23 18:28:59,121] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_SF_R1_fastqc.html [2024-05-23 18:28:59,129] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_BCells_SF_R1_fastqc.html [2024-05-23 18:28:59,198] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_AC_R1_fastqc.html [2024-05-23 18:28:59,209] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_AC_R1_fastqc.html [2024-05-23 18:28:59,288] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_AF_R1_fastqc.html [2024-05-23 18:28:59,296] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_AF_R1_fastqc.html [2024-05-23 18:28:59,371] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_SC_R1_fastqc.html [2024-05-23 18:28:59,378] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_SC_R1_fastqc.html [2024-05-23 18:28:59,447] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_SF_R1_fastqc.html [2024-05-23 18:28:59,454] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_GEX_SF_R1_fastqc.html [2024-05-23 18:28:59,524] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_AC_R1_fastqc.html [2024-05-23 18:28:59,532] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_AC_R1_fastqc.html [2024-05-23 18:28:59,603] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_AF_R1_fastqc.html [2024-05-23 18:28:59,611] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_AF_R1_fastqc.html [2024-05-23 18:28:59,687] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_SC_R1_fastqc.html [2024-05-23 18:28:59,698] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_SC_R1_fastqc.html [2024-05-23 18:28:59,772] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_SF_R1_fastqc.html [2024-05-23 18:28:59,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_CITE-seq_test2_TCells_SF_R1_fastqc.html [2024-05-23 18:28:59,854] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVKNTDMXY_n02_undetermined_fastqc.html [2024-05-23 18:28:59,860] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVKNTDMXY_n02_undetermined_fastqc.html [2024-05-23 18:29:00,388] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-05-23 18:29:00,389] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-05-23 18:29:00,404] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 13 samples (table) [2024-05-23 18:29:00,405] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-05-23 18:29:00,415] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-05-23 18:29:00,420] multiqc [DEBUG ] No samples found: conpair [2024-05-23 18:29:00,425] multiqc [DEBUG ] No samples found: peddy [2024-05-23 18:29:00,430] multiqc [DEBUG ] No samples found: somalier [2024-05-23 18:29:00,435] multiqc [DEBUG ] No samples found: methylQA [2024-05-23 18:29:00,444] multiqc [DEBUG ] No samples found: mosdepth [2024-05-23 18:29:00,448] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-05-23 18:29:00,452] multiqc [DEBUG ] No samples found: qualimap [2024-05-23 18:29:00,458] multiqc [DEBUG ] No samples found: preseq [2024-05-23 18:29:00,462] multiqc [DEBUG ] No samples found: quast [2024-05-23 18:29:00,467] multiqc [DEBUG ] No samples found: qorts [2024-05-23 18:29:00,472] multiqc [DEBUG ] No samples found: rna_seqc [2024-05-23 18:29:00,477] multiqc [DEBUG ] No samples found: rockhopper [2024-05-23 18:29:00,482] multiqc [DEBUG ] No samples found: rsem [2024-05-23 18:29:00,493] multiqc [DEBUG ] No samples found: rseqc [2024-05-23 18:29:00,498] multiqc [DEBUG ] No samples found: busco [2024-05-23 18:29:00,503] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-05-23 18:29:00,507] multiqc [DEBUG ] No samples found: disambiguate [2024-05-23 18:29:00,512] multiqc [DEBUG ] No samples found: supernova [2024-05-23 18:29:00,526] multiqc [DEBUG ] No samples found: deeptools [2024-05-23 18:29:00,532] multiqc [DEBUG ] No samples found: sargasso [2024-05-23 18:29:00,537] multiqc [DEBUG ] No samples found: verifybamid [2024-05-23 18:29:00,542] multiqc [DEBUG ] No samples found: mirtrace [2024-05-23 18:29:00,548] multiqc [DEBUG ] No samples found: happy [2024-05-23 18:29:00,554] multiqc [DEBUG ] No samples found: mirtop [2024-05-23 18:29:00,561] multiqc [DEBUG ] No samples found: homer [2024-05-23 18:29:00,565] multiqc [DEBUG ] No samples found: macs2 [2024-05-23 18:29:00,571] multiqc [DEBUG ] No samples found: theta2 [2024-05-23 18:29:00,576] multiqc [DEBUG ] No samples found: snpeff [2024-05-23 18:29:00,583] multiqc [DEBUG ] No samples found: gatk [2024-05-23 18:29:00,587] multiqc [DEBUG ] No samples found: htseq [2024-05-23 18:29:00,593] multiqc [DEBUG ] No samples found: bcftools [2024-05-23 18:29:00,598] multiqc [DEBUG ] No samples found: featureCounts [2024-05-23 18:29:00,605] multiqc [DEBUG ] No samples found: fgbio [2024-05-23 18:29:00,618] multiqc [DEBUG ] No samples found: dragen [2024-05-23 18:29:00,623] multiqc [DEBUG ] No samples found: dedup [2024-05-23 18:29:00,628] multiqc [DEBUG ] No samples found: damageprofiler [2024-05-23 18:29:00,651] multiqc [DEBUG ] No samples found: biobambam2 [2024-05-23 18:29:00,656] multiqc [DEBUG ] No samples found: mtnucratio [2024-05-23 18:29:00,658] multiqc [DEBUG ] No samples found: picard [2024-05-23 18:29:00,663] multiqc [DEBUG ] No samples found: prokka [2024-05-23 18:29:00,667] multiqc [DEBUG ] No samples found: samblaster [2024-05-23 18:29:00,677] multiqc [DEBUG ] No samples found: samtools [2024-05-23 18:29:00,681] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-05-23 18:29:00,687] multiqc [DEBUG ] No samples found: bamtools [2024-05-23 18:29:00,693] multiqc [DEBUG ] No samples found: jellyfish [2024-05-23 18:29:00,700] multiqc [DEBUG ] No samples found: vcftools [2024-05-23 18:29:00,705] multiqc [DEBUG ] No samples found: longranger [2024-05-23 18:29:00,711] multiqc [DEBUG ] No samples found: stacks [2024-05-23 18:29:00,715] multiqc [DEBUG ] No samples found: varscan2 [2024-05-23 18:29:00,730] multiqc [DEBUG ] No samples found: bbmap [2024-05-23 18:29:00,736] multiqc [DEBUG ] No samples found: bismark [2024-05-23 18:29:00,741] multiqc [DEBUG ] No samples found: biscuit [2024-05-23 18:29:00,746] multiqc [DEBUG ] No samples found: hicexplorer [2024-05-23 18:29:00,751] multiqc [DEBUG ] No samples found: hicup [2024-05-23 18:29:00,756] multiqc [DEBUG ] No samples found: hicpro [2024-05-23 18:29:00,760] multiqc [DEBUG ] No samples found: salmon [2024-05-23 18:29:00,765] multiqc [DEBUG ] No samples found: kallisto [2024-05-23 18:29:00,770] multiqc [DEBUG ] No samples found: slamdunk [2024-05-23 18:29:00,775] multiqc [DEBUG ] No samples found: star [2024-05-23 18:29:00,780] multiqc [DEBUG ] No samples found: hisat2 [2024-05-23 18:29:00,785] multiqc [DEBUG ] No samples found: tophat [2024-05-23 18:29:00,790] multiqc [DEBUG ] No samples found: bowtie2 [2024-05-23 18:29:00,794] multiqc [DEBUG ] No samples found: bowtie1 [2024-05-23 18:29:00,799] multiqc [DEBUG ] No samples found: snpsplit [2024-05-23 18:29:00,804] multiqc [DEBUG ] No samples found: kat [2024-05-23 18:29:00,809] multiqc [DEBUG ] No samples found: leehom [2024-05-23 18:29:00,814] multiqc [DEBUG ] No samples found: adapterRemoval [2024-05-23 18:29:00,819] multiqc [DEBUG ] No samples found: clipandmerge [2024-05-23 18:29:00,824] multiqc [DEBUG ] No samples found: cutadapt [2024-05-23 18:29:00,829] multiqc [DEBUG ] No samples found: flexbar [2024-05-23 18:29:00,833] multiqc [DEBUG ] No samples found: kaiju [2024-05-23 18:29:00,838] multiqc [DEBUG ] No samples found: kraken [2024-05-23 18:29:00,843] multiqc [DEBUG ] No samples found: malt [2024-05-23 18:29:00,847] multiqc [DEBUG ] No samples found: trimmomatic [2024-05-23 18:29:00,852] multiqc [DEBUG ] No samples found: sickle [2024-05-23 18:29:00,857] multiqc [DEBUG ] No samples found: skewer [2024-05-23 18:29:00,862] multiqc [DEBUG ] No samples found: sortmerna [2024-05-23 18:29:00,866] multiqc [DEBUG ] No samples found: biobloomtools [2024-05-23 18:29:00,871] multiqc [DEBUG ] No samples found: fastq_screen [2024-05-23 18:29:00,876] multiqc [DEBUG ] No samples found: afterqc [2024-05-23 18:29:00,881] multiqc [DEBUG ] No samples found: fastp [2024-05-23 18:29:03,349] multiqc.modules.fastqc.fastqc [INFO ] Found 26 reports [2024-05-23 18:29:03,574] multiqc [DEBUG ] No samples found: pycoqc [2024-05-23 18:29:03,580] multiqc [DEBUG ] No samples found: minionqc [2024-05-23 18:29:03,585] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-05-23 18:29:03,590] multiqc [DEBUG ] No samples found: clusterflow [2024-05-23 18:29:03,595] multiqc [DEBUG ] No samples found: bcl2fastq [2024-05-23 18:29:03,600] multiqc [DEBUG ] No samples found: interop [2024-05-23 18:29:03,605] multiqc [DEBUG ] No samples found: ivar [2024-05-23 18:29:03,610] multiqc [DEBUG ] No samples found: flash [2024-05-23 18:29:03,615] multiqc [DEBUG ] No samples found: seqyclean [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-05-23 18:29:03,615] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-05-23 18:29:03,616] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-05-23 18:29:03,647] multiqc [INFO ] Compressing plot data [2024-05-23 18:29:04,071] multiqc [INFO ] Report : multiqc_report.html [2024-05-23 18:29:04,071] multiqc [INFO ] Data : multiqc_data [2024-05-23 18:29:04,071] multiqc [DEBUG ] Moving data file from '/state/partition1/job-46942794/tmpkwj_9nqa/multiqc_data' to '/vast/gencore/GENEFLOW/work/e3/4ca11f4734bd7f08fdbff6eb1efd35/merged/multiqc_data' [2024-05-23 18:29:04,249] multiqc [INFO ] MultiQC complete