Sample basic_statistics per_base_n_content avg_sequence_length Total Sequences kmer_content Filename adapter_content per_sequence_gc_content File type sequence_duplication_levels Sequence length per_base_sequence_content per_tile_sequence_quality %GC Sequences flagged as poor quality total_deduplicated_percentage per_base_sequence_quality Encoding sequence_length_distribution overrepresented_sequences per_sequence_quality_scores HVJH5AFXX_n01_ah8104spike-chip_11082017 pass pass 100.0 8275537.0 fail HVJH5AFXX_n01_ah8104spike-chip_11082017.fastq.gz pass warn Conventional base calls warn 100.0 warn pass 39.0 0.0 65.12159444447431 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8104spike-inp_11082017 pass pass 100.0 6293112.0 fail HVJH5AFXX_n01_ah8104spike-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 fail pass 39.0 0.0 75.88361940693004 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah8115spike-chip_11082017 pass pass 100.0 5651566.0 fail HVJH5AFXX_n01_ah8115spike-chip_11082017.fastq.gz pass warn Conventional base calls warn 100.0 warn pass 42.0 0.0 67.34660079840337 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8115spike-inp_11082017 pass pass 100.0 6159543.0 fail HVJH5AFXX_n01_ah8115spike-inp_11082017.fastq.gz pass fail Conventional base calls pass 100.0 warn pass 40.0 0.0 77.17493605654741 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah8151spike-chip_11082017 pass pass 100.0 6650254.0 fail HVJH5AFXX_n01_ah8151spike-chip_11082017.fastq.gz pass fail Conventional base calls warn 100.0 warn pass 43.0 0.0 68.72207816764761 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8151spike-inp_11082017 pass pass 100.0 6347240.0 fail HVJH5AFXX_n01_ah8151spike-inp_11082017.fastq.gz pass fail Conventional base calls pass 100.0 warn pass 40.0 0.0 77.76123736017732 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah8583-chip_11082017 pass pass 100.0 5238204.0 fail HVJH5AFXX_n01_ah8583-chip_11082017.fastq.gz pass fail Conventional base calls pass 100.0 warn pass 40.0 0.0 71.0773540414717 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8583-inp_11082017 pass pass 100.0 6160211.0 fail HVJH5AFXX_n01_ah8583-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 warn pass 39.0 0.0 76.49725766503558 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah8583spike-chip_11082017 pass pass 100.0 6523069.0 fail HVJH5AFXX_n01_ah8583spike-chip_11082017.fastq.gz pass warn Conventional base calls warn 100.0 warn pass 39.0 0.0 68.51708385017413 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8583spike-inp_11082017 pass pass 100.0 7134442.0 fail HVJH5AFXX_n01_ah8583spike-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 warn pass 39.0 0.0 75.22498713391646 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah8584-chip_11082017 pass pass 100.0 7510212.0 fail HVJH5AFXX_n01_ah8584-chip_11082017.fastq.gz pass fail Conventional base calls warn 100.0 fail pass 40.0 0.0 62.634069349442136 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8584-inp_11082017 pass pass 100.0 7137077.0 fail HVJH5AFXX_n01_ah8584-inp_11082017.fastq.gz pass warn Conventional base calls pass 100.0 warn pass 40.0 0.0 72.57192404327844 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8584spike-chip_11082017 pass pass 100.0 8456199.0 fail HVJH5AFXX_n01_ah8584spike-chip_11082017.fastq.gz pass warn Conventional base calls warn 100.0 warn pass 39.0 0.0 64.07670355063388 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah8584spike-inp_11082017 pass pass 100.0 6700255.0 fail HVJH5AFXX_n01_ah8584spike-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 warn pass 39.0 0.0 75.77650974600103 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah9120-chip_11082017 pass pass 100.0 6630414.0 fail HVJH5AFXX_n01_ah9120-chip_11082017.fastq.gz pass warn Conventional base calls warn 100.0 warn pass 39.0 0.0 64.9291732755177 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah9120-inp_11082017 pass pass 100.0 5554514.0 fail HVJH5AFXX_n01_ah9120-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 warn pass 38.0 0.0 76.33741419595572 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah9120spike-chip_11082017 pass pass 100.0 7999313.0 fail HVJH5AFXX_n01_ah9120spike-chip_11082017.fastq.gz pass fail Conventional base calls warn 100.0 fail pass 42.0 0.0 62.19772919206905 pass Sanger / Illumina 1.9 pass fail pass HVJH5AFXX_n01_ah9120spike-inp_11082017 pass pass 100.0 5502875.0 fail HVJH5AFXX_n01_ah9120spike-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 warn pass 39.0 0.0 77.43725434285693 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah9251-chip_11082017 pass pass 100.0 8330153.0 fail HVJH5AFXX_n01_ah9251-chip_11082017.fastq.gz pass warn Conventional base calls warn 100.0 warn pass 39.0 0.0 66.48826311536405 pass Sanger / Illumina 1.9 pass warn pass HVJH5AFXX_n01_ah9251-inp_11082017 pass pass 100.0 5608306.0 fail HVJH5AFXX_n01_ah9251-inp_11082017.fastq.gz pass pass Conventional base calls pass 100.0 warn pass 38.0 0.0 77.7705765676856 pass Sanger / Illumina 1.9 pass warn pass