Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HVJ2YDRX3_n01_R13_macrophage HVJ2YDRX3_n01_R13_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 98340899.0 0.0 101.0 46.0 0.25840922434508584 101.0 pass pass warn pass fail pass pass pass fail fail pass HVJ2YDRX3_n01_R14_macrophage HVJ2YDRX3_n01_R14_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 85143727.0 0.0 101.0 46.0 0.2769709096243733 101.0 pass pass warn pass fail pass pass pass fail fail pass HVJ2YDRX3_n01_R15_macrophage HVJ2YDRX3_n01_R15_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 99214678.0 0.0 101.0 46.0 0.2693336296251288 101.0 pass pass warn pass fail pass pass pass fail fail pass HVJ2YDRX3_n01_R16_macrophage HVJ2YDRX3_n01_R16_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 90957189.0 0.0 101.0 46.0 0.27282345195405244 101.0 pass pass warn pass fail warn pass pass fail fail pass HVJ2YDRX3_n01_R17_macrophage HVJ2YDRX3_n01_R17_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 101296047.0 0.0 101.0 46.0 0.2671848152998921 101.0 pass pass warn pass fail pass pass pass fail fail pass HVJ2YDRX3_n01_R18_macrophage HVJ2YDRX3_n01_R18_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 74793384.0 0.0 101.0 46.0 0.2909997686687329 101.0 pass pass warn pass fail pass pass pass fail fail pass HVJ2YDRX3_n01_R19_macrophage HVJ2YDRX3_n01_R19_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 55635124.0 0.0 101.0 46.0 0.26142224198201436 101.0 pass pass warn pass fail warn pass pass fail fail pass HVJ2YDRX3_n01_R20_macrophage HVJ2YDRX3_n01_R20_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 41669557.0 0.0 101.0 46.0 0.2882271962112204 101.0 pass pass warn pass fail warn pass pass fail fail pass HVJ2YDRX3_n01_R21_macrophage HVJ2YDRX3_n01_R21_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 42191329.0 0.0 101.0 46.0 0.2868681453200565 101.0 pass pass warn pass fail pass pass pass fail fail pass HVJ2YDRX3_n01_R22_macrophage HVJ2YDRX3_n01_R22_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 35750773.0 0.0 101.0 46.0 0.31322468842288553 101.0 pass pass warn pass fail warn pass pass fail fail pass HVJ2YDRX3_n01_R23_macrophage HVJ2YDRX3_n01_R23_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 55632030.0 0.0 101.0 46.0 0.2615584963717369 101.0 pass pass warn pass fail warn pass pass fail fail pass HVJ2YDRX3_n01_R24_macrophage HVJ2YDRX3_n01_R24_macrophage.fastq.gz Conventional base calls Sanger / Illumina 1.9 59839009.0 0.0 101.0 46.0 0.25809876628232153 101.0 pass pass warn pass fail warn pass pass fail fail pass HVJ2YDRX3_n01_undetermined HVJ2YDRX3_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 109343861.0 0.0 101.0 44.0 1.3057847700854628 101.0 pass pass fail pass warn warn pass pass fail fail pass