HVHWMBCXY_l02n02_input_ctrl_replicate_1_root_h3k27me3.3520000009e5a3.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l02n02_input_ctrl_replicate_1_root_h3k27me3.3520000009e5a3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	91142458
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGGGA	52225	0.0	8.049933	45
TAGGGAA	46775	0.0	7.9630246	45
TGTAGGG	64375	0.0	7.8311343	45
GTGTAGG	78590	0.0	7.136325	45
CTTCCGA	19705	0.0	6.542222	9
AGGGAAA	54910	0.0	6.4144106	45
CGTGTAG	91170	0.0	6.3984814	45
GGGAAAG	43525	0.0	6.349704	45
TCGTGTA	104035	0.0	6.2519026	45
TTCCGAT	21405	0.0	6.1277404	10
CGTGTGC	22555	0.0	6.0652113	1
GTGTGCT	22785	0.0	6.003987	2
GTGCTCT	21660	0.0	5.9626403	4
GTCGTGT	122625	0.0	5.7904754	45
TGTGCTC	23875	0.0	5.579092	3
GGAAAGA	46320	0.0	5.1794367	45
AAAGAGT	24315	0.0	5.109267	45
TCCGATC	25685	0.0	5.0978904	11