HVHWMBCXY_l02n02_chip_ctrl_replicate_3_root_h3k27me3.3520000009e589.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l02n02_chip_ctrl_replicate_3_root_h3k27me3.3520000009e589.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4219370
Sequences flagged as poor quality	0
Sequence length	51
%GC	54

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGGGA	3310	0.0	8.703997	45
TAGGGAA	2735	0.0	8.065021	45
TGTAGGG	4060	0.0	7.9276915	45
GGGAAAG	2635	0.0	7.175223	45
GTGTAGG	5060	0.0	6.8947406	45
AAAGAGT	1095	0.0	6.7832303	45
AAGAGTG	800	2.048182E-9	6.752397	45
AGGGAAA	3145	0.0	6.5842133	45
GGAAAGA	2485	0.0	6.1591287	45
CGTGTAG	5790	0.0	6.142077	44
TCGTGTA	6440	0.0	6.0813518	45
GAAAGAG	2175	0.0	5.795161	45
GTGTGCT	890	7.883027E-7	5.5616627	2
GTCGTGT	7440	0.0	5.415229	44
CGTGTGC	1045	5.8073965E-7	5.167339	1