HVHWMBCXY_l02n02_chip_ctrl_replicate_1_root_h3k9ac.3520000009e601.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l02n02_chip_ctrl_replicate_1_root_h3k9ac.3520000009e601.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4492711
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTGT	2580	0.0	8.112393	45
CGTGTAG	1850	0.0	7.4206834	45
TCGTGTA	2130	0.0	6.9734883	45
TGTAGGG	1220	0.0	6.8253922	45
AAGAGCG	6535	0.0	6.7154446	45
AGCGTCG	4570	0.0	6.106484	45
GAGCGTC	4900	0.0	5.9708066	45
GCGTCGT	4455	0.0	5.961013	45
AGAGCGT	5375	0.0	5.945599	45
CGTCGTG	3940	0.0	5.769138	44
ATCGGAA	12140	0.0	5.7097588	45
GTGTAGG	1540	0.0	5.6994066	44
GAAGAGC	8035	0.0	5.461784	44
TTCCGAT	830	7.720762E-6	5.4212856	10
GATCGGA	14165	0.0	5.3860316	45
CGGAAGA	10230	0.0	5.2578483	45
TCGGAAG	10880	0.0	5.1712656	45
CTTCCGA	960	3.3496544E-6	5.155869	9
AGATCGG	16180	0.0	5.0073705	45