HVHWMBCXY_l02n01_input_ctrl_replicate_3_root_h3k27me3.3510000009e5e9.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l02n01_input_ctrl_replicate_3_root_h3k27me3.3510000009e5e9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7268478
Sequences flagged as poor quality	0
Sequence length	51
%GC	56

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTCCAG	3550	0.0	8.87355	45
TCCAGTC	2455	0.0	8.340414	45
CGTCTGA	11585	0.0	8.099118	45
CTCCAGT	2705	0.0	7.819127	45
TCTGAAC	8455	0.0	7.6909847	45
GTCTGAA	9935	0.0	7.519136	45
GAACTCC	5710	0.0	7.447721	45
TGAACTC	6625	0.0	7.336106	45
AACTCCA	4950	0.0	7.18207	45
ACGTCTG	13665	0.0	7.0474477	45
CTGAACT	7410	0.0	6.9536853	45
CACGTCT	16295	0.0	6.5037565	45
ACACGTC	19005	0.0	6.1091323	45
CCAGTCA	1695	0.0	5.9736605	45
CACACGT	21695	0.0	5.725022	45
AGCACAC	28470	0.0	5.12136	45
GCACACG	25735	0.0	5.079836	45