Basic Statistics
Measure | Value |
---|---|
Filename | HVHWMBCXY_l02n01_input_ctrl_replicate_1_root_h3k27me3.3510000009e5a6.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 91142458 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTCTGA | 75945 | 0.0 | 7.41561 | 45 |
GTCTGAA | 69945 | 0.0 | 7.208923 | 45 |
TCTGAAC | 63440 | 0.0 | 6.894746 | 45 |
CTGAACT | 57125 | 0.0 | 6.888883 | 45 |
TGAACTC | 51805 | 0.0 | 6.705958 | 45 |
ACGTCTG | 88010 | 0.0 | 6.626561 | 45 |
GAACTCC | 42505 | 0.0 | 6.4263425 | 45 |
ACTCCAG | 26995 | 0.0 | 6.2011867 | 45 |
CACGTCT | 105150 | 0.0 | 6.1648026 | 45 |
ACACGTC | 121450 | 0.0 | 5.848739 | 45 |
AACTCCA | 41815 | 0.0 | 5.5638275 | 45 |
CACACGT | 138145 | 0.0 | 5.4660296 | 45 |
CTCCAGT | 23725 | 0.0 | 5.073793 | 45 |
GCACACG | 163745 | 0.0 | 5.0607963 | 45 |