Basic Statistics
Measure | Value |
---|---|
Filename | HVHWMBCXY_l02n01_chip_ctrl_replicate_3_root_h3k27me3.3510000009e58c.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4219370 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACTCCAG | 1445 | 0.0 | 8.097063 | 45 |
TCTGAAC | 3685 | 0.0 | 7.8766985 | 45 |
GTCTGAA | 4270 | 0.0 | 7.8514595 | 45 |
GAACTCC | 2505 | 0.0 | 7.814542 | 45 |
TGAACTC | 2925 | 0.0 | 7.3078523 | 45 |
CGTCTGA | 4905 | 0.0 | 6.926757 | 45 |
CTGAACT | 3260 | 0.0 | 6.9019914 | 45 |
CTCCAGT | 1160 | 0.0 | 6.788941 | 45 |
AACTCCA | 2230 | 0.0 | 6.6593385 | 45 |
ACGTCTG | 5610 | 0.0 | 6.256821 | 45 |
CACGTCT | 6530 | 0.0 | 6.0989084 | 45 |
ACACGTC | 7340 | 0.0 | 5.4257393 | 44 |
AGCACAC | 10945 | 0.0 | 5.2216763 | 45 |
CACACGT | 8380 | 0.0 | 5.1283937 | 45 |