HVHWMBCXY_l02n01_chip_ctrl_replicate_1_root_h3k9ac.3510000009e604.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l02n01_chip_ctrl_replicate_1_root_h3k9ac.3510000009e604.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4492711
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTCTG	1460	0.0	8.629998	45
ACACGTC	2570	0.0	8.492081	45
CACGTCT	2165	0.0	7.5864835	45
CGTCTGA	1230	0.0	7.3169556	45
CACACGT	3220	0.0	6.987543	44
AAGAGCA	7285	0.0	6.176977	45
GCACACG	4270	0.0	6.1123137	45
AGCACAC	4785	0.0	5.9246697	45
GAAGAGC	7860	0.0	5.81104	44
AGAGCAC	6000	0.0	5.774907	45
ATCGGAA	12255	0.0	5.7098227	45
GTCTGAA	1445	1.8189894E-12	5.605446	45
GAGCACA	5310	0.0	5.5083857	45
CGGAAGA	10240	0.0	5.361242	45
GATCGGA	14360	0.0	5.3428807	45
TCGGAAG	10815	0.0	5.22183	45