HVHWMBCXY_l02n01_chip_ctrl_replicate_1_root_h3k27me3.3510000009e53c.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l02n01_chip_ctrl_replicate_1_root_h3k27me3.3510000009e53c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2670539
Sequences flagged as poor quality	0
Sequence length	51
%GC	57

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACTCCA	1450	0.0	12.5689335	45
TGAACTC	2460	0.0	10.33534	45
CTGAACT	2900	0.0	9.853423	45
GAACTCC	1920	0.0	9.374802	44
TCTGAAC	3470	0.0	9.077787	45
GTCTGAA	4230	0.0	9.042531	45
CTCCAGT	725	0.0	8.689633	45
ACTCCAG	1060	0.0	8.490544	45
CGTCTGA	5160	0.0	8.2848625	45
ACGTCTG	6080	0.0	7.068106	44
TATCAAC	425	0.001786239	6.353401	2
CACGTCT	7060	0.0	6.278313	45
ACACGTC	8055	0.0	6.145236	45
CACACGT	9260	0.0	5.855817	45
GTAGTTG	560	0.0010647622	5.6268826	1
TCCAGTC	810	2.9561126E-5	5.2777643	45
CTTGCAC	660	0.0015008239	5.1153474	1
GCACACG	10660	0.0	5.107772	44