HVHWMBCXY_l01n02_input_ctrl_replicate_1_shoot_h3k27me3.3520000009e596.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l01n02_input_ctrl_replicate_1_shoot_h3k27me3.3520000009e596.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1433279
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGAGCG	1600	0.0	7.5962124	45
TGTAGGG	555	2.823559E-6	6.894126	45
GAAGAGC	1995	0.0	6.3178368	44
GTGTAGG	665	7.121984E-6	6.0922	44
CGTGTAG	740	6.454442E-6	5.7789	43
TAGGGAA	475	0.006161253	5.6860533	44
AGCGTCG	1115	2.2064341E-9	5.652056	43
TCGTGTA	785	1.7445387E-5	5.4468646	42
CGGAAGA	2330	0.0	5.312139	42
CGTCGTG	1195	1.169974E-8	5.273676	45
GAGCGTC	1160	3.263267E-8	5.238035	42
GGAAGAG	2520	0.0	5.18025	43
TCGGAAG	2360	0.0	5.1488957	41
GTCGTGT	835	4.869722E-5	5.1203475	41
AAGATCG	855	7.164928E-5	5.0016212	45