Basic Statistics
Measure | Value |
---|---|
Filename | HVHWMBCXY_l01n02_chip_ctrl_replicate_3_shoot_h3k27me3.3520000009e57c.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3186527 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAGAGT | 1055 | 0.0 | 8.533517 | 45 |
TAGGGAA | 2450 | 0.0 | 8.084201 | 45 |
GTAGGGA | 2875 | 0.0 | 7.985145 | 45 |
GTGTAGG | 4255 | 0.0 | 7.775678 | 45 |
TGTAGGG | 3355 | 0.0 | 7.647735 | 45 |
GGGAAAG | 2280 | 0.0 | 7.206237 | 45 |
CGTGTAG | 4845 | 0.0 | 6.8287945 | 44 |
AGGGAAA | 2790 | 0.0 | 6.534334 | 45 |
GAAAGAG | 1830 | 0.0 | 6.3954744 | 45 |
TCGTGTA | 5225 | 0.0 | 6.2029276 | 43 |
AAGAGTG | 760 | 1.6169724E-6 | 5.922934 | 45 |
GGAAAGA | 2215 | 0.0 | 5.690295 | 45 |
GTCGTGT | 5960 | 0.0 | 5.4377985 | 42 |