Basic Statistics
Measure | Value |
---|---|
Filename | HVHWMBCXY_l01n02_chip_ctrl_replicate_2_shoot_h3k27me3.3520000009e56f.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15606756 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAGAGT | 4785 | 0.0 | 7.5260606 | 45 |
TAGGGAA | 10880 | 0.0 | 7.426688 | 45 |
GTAGGGA | 12745 | 0.0 | 7.3818655 | 45 |
TGTAGGG | 14890 | 0.0 | 6.8626337 | 45 |
GTGTAGG | 18075 | 0.0 | 6.1888185 | 45 |
GGGAAAG | 10885 | 0.0 | 6.1619406 | 45 |
AGGGAAA | 12725 | 0.0 | 6.155327 | 45 |
AAGAGTG | 4010 | 0.0 | 5.9496465 | 45 |
GGAAAGA | 10355 | 0.0 | 5.716567 | 45 |
CGTGTAG | 20470 | 0.0 | 5.684632 | 45 |
GAAAGAG | 9020 | 0.0 | 5.464711 | 45 |
TCGTGTA | 22855 | 0.0 | 5.416405 | 45 |
AGAGTGT | 2835 | 0.0 | 5.3986545 | 45 |