HVHWMBCXY_l01n01_input_ctrl_replicate_1_shoot_h3k27me3.3510000009e599.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVHWMBCXY_l01n01_input_ctrl_replicate_1_shoot_h3k27me3.3510000009e599.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1433279
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTGA	510	9.973519E-9	8.382177	44
GTCTGAA	620	4.0667146E-8	7.257912	45
AAGAGCA	1930	0.0	6.7615166	45
CGAGAAC	340	0.009690967	6.617739	30
ACGTCTG	660	9.214855E-7	6.477137	43
GAAGAGC	2005	0.0	6.396375	44
ACACGTC	795	5.738093E-7	5.9432716	41
CACACGT	995	5.7516445E-9	5.879274	45
CGGAAGA	2210	0.0	5.5994306	42
GCACACG	1090	7.732524E-9	5.573278	44
GAGCACA	1265	2.6557245E-10	5.513718	42
TCGGAAG	2250	0.0	5.399887	41
GGAAGAG	2385	0.0	5.377246	43
CACGTCT	840	9.478748E-6	5.3570304	42
TCTGAAC	615	0.0034722611	5.121844	43