Basic Statistics
Measure | Value |
---|---|
Filename | HVHWMBCXY_l01n01_chip_ctrl_replicate_3_shoot_h3k27me3.3510000009e57f.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3186527 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCCAGT | 1120 | 0.0 | 8.438005 | 45 |
CGTCTGA | 4080 | 0.0 | 7.996803 | 45 |
GAACTCC | 2055 | 0.0 | 7.5551972 | 45 |
ACTCCAG | 1325 | 0.0 | 7.4721465 | 45 |
TGAACTC | 2430 | 0.0 | 7.407851 | 45 |
GTCTGAA | 3605 | 0.0 | 7.177962 | 45 |
AACTCCA | 1830 | 0.0 | 7.0086174 | 45 |
ACGTCTG | 4615 | 0.0 | 6.9722495 | 44 |
TCTGAAC | 3135 | 0.0 | 6.9621406 | 45 |
CTGAACT | 2925 | 0.0 | 6.9234924 | 45 |
CACGTCT | 5350 | 0.0 | 6.0140014 | 43 |
ACACGTC | 5900 | 0.0 | 5.5296454 | 42 |
GCTCTAT | 535 | 0.0038132616 | 5.46736 | 2 |
TCCAGTC | 825 | 4.004089E-5 | 5.182129 | 45 |