Basic Statistics
Measure | Value |
---|---|
Filename | HVHWMBCXY_l01n01_chip_ctrl_replicate_2_shoot_h3k27me3.3510000009e562.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15606756 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACTCCAG | 6415 | 0.0 | 7.4708385 | 45 |
TGAACTC | 11155 | 0.0 | 6.898313 | 45 |
GAACTCC | 9720 | 0.0 | 6.851913 | 45 |
CTCCAGT | 5330 | 0.0 | 6.8387103 | 45 |
TCTGAAC | 14190 | 0.0 | 6.7389607 | 45 |
GTCTGAA | 15580 | 0.0 | 6.556541 | 45 |
CGTCTGA | 16740 | 0.0 | 6.518875 | 45 |
CTGAACT | 12690 | 0.0 | 6.4894195 | 45 |
AACTCCA | 9520 | 0.0 | 6.003205 | 45 |
ACGTCTG | 19435 | 0.0 | 5.9853888 | 45 |
TCCAGTC | 4710 | 0.0 | 5.398137 | 45 |
CACGTCT | 22915 | 0.0 | 5.351346 | 45 |
CCAGTCA | 3445 | 0.0 | 5.0943847 | 45 |