HVHNYAFXX_n02_ds774-023-2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVHNYAFXX_n02_ds774-023-2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9048748
Sequences flagged as poor quality	0
Sequence length	75
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAAGGGGGGG	137186	1.5160771412796556	Illumina Single End PCR Primer 1 (100% over 58bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	95867	1.0594504344689453	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAGGGG	19335	54.61647	66
AAGGGGG	21285	49.580433	67
AGGGGGG	22845	46.526997	68
CGCCGTA	24595	43.38887	47
AAAAGGG	24565	43.3678	65
CCGTATC	24695	43.297	49
GCCGTAT	24950	42.813	48
GCACACG	2235	42.139057	18
TCGCCGT	25100	41.97982	46
CGTATCA	26285	40.809196	50
GTCGCCG	25940	40.700214	45
GGTCGCC	26015	40.47678	44
GTATCAT	27195	39.364037	51
GTGGTCG	27235	38.74972	42
CTCGGTG	27435	38.428238	38
TCTCGGT	27650	38.116955	37
ATCTCGG	27735	38.03745	36
TGGTCGC	28240	37.272972	43
TCGGTGG	28380	37.246105	39
GGTGGTC	28400	37.14699	41