HVHNVAFXX_n01_3035_d8_nw.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVHNVAFXX_n01_3035_d8_nw.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33235
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG	190	0.5716864751015496	No Hit
GAGCAAAAGCAGGTAGATATTTAAAGATGAGTCTTCTAACCGAGGTCGAA	139	0.4182337896795547	No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC	76	0.22867459004061982	No Hit
GTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGG	72	0.21663908530163983	No Hit
GAGCAAAAGCAGGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGG	58	0.17451481871520988	No Hit
GAGCAAAAGCAGGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGA	53	0.1594704377914849	No Hit
GTATATACATACATATATACTTACACAGTTTGAGCATTCACAGGCCACTA	46	0.13840830449826988	No Hit
GAGCAAAAGCAGGGGAAGTGGGAGAGGGAAAAGGAGAAGGAAGCTTCCCT	45	0.13539942831352492	No Hit
GCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAGCT	45	0.13539942831352492	No Hit
ATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTAC	45	0.13539942831352492	No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGT	44	0.1323905521287799	No Hit
GAGCAAAAGCAGGGGAAAACAAAAGCAACAAAAATGAAGGCAATACTAGT	42	0.1263727997592899	No Hit
GGTCCAATCGCACGCAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGC	41	0.12336392357454491	No Hit
TCCACCTACTAGTGCTGACCAACAAAGTCTCTATCAGAATGCAGATGCAT	41	0.12336392357454491	No Hit
ATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATC	39	0.11734617120505492	No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCC	37	0.11132841883556492	No Hit
GGCAAGTGCACCAGTTGAATAGCTTAGTGACACCTCCTTGGCCCCATGGA	36	0.10831954265081992	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAC	15	1.253488E-4	144.00002	1
AATTGTG	10	0.0072078314	144.0	7
GCAGGTA	25	9.5658394E-4	86.399994	9
ATATACT	30	0.001972662	72.00001	5
GCAAAAG	130	0.0	72.0	3
GAGCAAA	150	0.0	72.0	1
AGCAGGT	55	4.1425646E-6	65.454544	8
CGAAAGC	35	0.0036345047	61.714283	3
GCGAAAG	35	0.0036345047	61.714283	2
GACAATA	35	0.0036345047	61.714283	1
GAATAAG	35	0.0036345047	61.714283	1
TCCTACA	35	0.0036345047	61.714283	2
AGCGAAA	35	0.0036345047	61.714283	1
GAGGCTA	35	0.0036345047	61.714283	9
AGCAAAA	160	0.0	58.5	2
CAAAAGC	165	0.0	56.727276	4
GCAGGAG	40	0.006166216	54.0	9
AAGCAGG	210	0.0	51.42857	7
AAAAGCA	185	0.0	50.594593	5
GCAGGGT	100	4.7744834E-8	50.399998	9