Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage basic_statistics per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content avg_sequence_length per_base_sequence_quality per_sequence_quality_scores per_tile_sequence_quality HVHMMBGXM_n01_R01 HVHMMBGXM_n01_R01.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R01rc HVHMMBGXM_n01_R01rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R02 HVHMMBGXM_n01_R02.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 40.0 100.0 pass fail fail fail pass pass fail pass 151.0 pass warn HVHMMBGXM_n01_R02rc HVHMMBGXM_n01_R02rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 48.0 100.0 pass fail fail pass pass pass fail pass 151.0 pass pass HVHMMBGXM_n01_R03 HVHMMBGXM_n01_R03.fastq.gz Conventional base calls Sanger / Illumina 1.9 4.0 0.0 151.0 47.0 100.0 pass fail fail pass pass pass fail fail 151.0 pass pass HVHMMBGXM_n01_R03rc HVHMMBGXM_n01_R03rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R04 HVHMMBGXM_n01_R04.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 50.0 100.0 pass fail fail pass pass pass fail fail 151.0 pass pass HVHMMBGXM_n01_R04rc HVHMMBGXM_n01_R04rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 9.0 0.0 151.0 47.0 88.88888888888889 pass fail fail pass pass pass fail fail 151.0 pass pass HVHMMBGXM_n01_R05 HVHMMBGXM_n01_R05.fastq.gz Conventional base calls Sanger / Illumina 1.9 24.0 0.0 151.0 87.0 66.66666666666666 pass fail fail pass pass warn fail warn 151.0 pass pass warn HVHMMBGXM_n01_R05rc HVHMMBGXM_n01_R05rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R06 HVHMMBGXM_n01_R06.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 43.0 100.0 pass fail fail pass pass pass fail fail 151.0 pass pass HVHMMBGXM_n01_R06rc HVHMMBGXM_n01_R06rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R07 HVHMMBGXM_n01_R07.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 46.0 100.0 pass fail fail pass pass pass fail pass 151.0 pass pass HVHMMBGXM_n01_R07rc HVHMMBGXM_n01_R07rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R08 HVHMMBGXM_n01_R08.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R08rc HVHMMBGXM_n01_R08rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 41.0 0.0 151.0 45.0 92.6829268292683 pass fail fail pass pass pass fail fail 151.0 pass pass fail HVHMMBGXM_n01_R09 HVHMMBGXM_n01_R09.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R09rc HVHMMBGXM_n01_R09rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 6.0 0.0 151.0 49.0 100.0 pass fail fail pass pass pass fail pass 151.0 pass pass HVHMMBGXM_n01_R10 HVHMMBGXM_n01_R10.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R10rc HVHMMBGXM_n01_R10rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R11 HVHMMBGXM_n01_R11.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R11rc HVHMMBGXM_n01_R11rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 1.0 0.0 151.0 45.0 100.0 pass fail fail pass pass pass fail fail 151.0 pass pass HVHMMBGXM_n01_R12 HVHMMBGXM_n01_R12.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R12rc HVHMMBGXM_n01_R12rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R13_2 HVHMMBGXM_n01_R13_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 9821991.0 0.0 151.0 46.0 1.5842953335175682 pass fail fail pass pass fail fail fail 151.0 fail pass fail HVHMMBGXM_n01_R13rc HVHMMBGXM_n01_R13rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R14_2 HVHMMBGXM_n01_R14_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 9433956.0 0.0 151.0 46.0 1.7349108338195802 pass fail fail pass pass fail fail fail 151.0 fail pass fail HVHMMBGXM_n01_R14rc HVHMMBGXM_n01_R14rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R15_2 HVHMMBGXM_n01_R15_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7166671.0 0.0 151.0 45.0 2.2900188126120473 pass fail fail pass pass fail fail fail 151.0 fail pass fail HVHMMBGXM_n01_R15rc HVHMMBGXM_n01_R15rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R16_2 HVHMMBGXM_n01_R16_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7768074.0 0.0 151.0 45.0 2.2540386845300477 pass fail fail pass pass fail fail fail 151.0 fail pass fail HVHMMBGXM_n01_R16rc HVHMMBGXM_n01_R16rc.fastq.gz Conventional base calls Sanger / Illumina 1.9 3.0 0.0 151.0 46.0 100.0 pass fail fail pass pass pass fail fail 151.0 pass pass HVHMMBGXM_n01_R17_2 HVHMMBGXM_n01_R17_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 5385065.0 0.0 151.0 45.0 2.821682621883913 pass fail fail pass pass fail fail fail 151.0 fail pass fail HVHMMBGXM_n01_R17rc HVHMMBGXM_n01_R17rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R18_2 HVHMMBGXM_n01_R18_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 5973792.0 0.0 151.0 45.0 2.71796628401734 pass fail fail pass pass fail fail fail 151.0 fail pass fail HVHMMBGXM_n01_R18rc HVHMMBGXM_n01_R18rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R19_2 HVHMMBGXM_n01_R19_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7369033.0 0.0 151.0 46.0 2.9921729757458784 pass fail fail pass pass fail fail warn 151.0 warn pass fail HVHMMBGXM_n01_R19rc HVHMMBGXM_n01_R19rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R20_2 HVHMMBGXM_n01_R20_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7596060.0 0.0 151.0 47.0 3.184066361046072 pass fail fail pass pass fail fail pass 151.0 warn pass fail HVHMMBGXM_n01_R20rc HVHMMBGXM_n01_R20rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R21_2 HVHMMBGXM_n01_R21_2.fastq.gz Conventional base calls Sanger / Illumina 1.9 7435215.0 0.0 151.0 47.0 2.9420086654050737 pass fail fail pass pass fail fail pass 151.0 warn pass fail HVHMMBGXM_n01_R21rc HVHMMBGXM_n01_R21rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R22_2 HVHMMBGXM_n01_R22_2.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R22rc HVHMMBGXM_n01_R22rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R23_2 HVHMMBGXM_n01_R23_2.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R23rc HVHMMBGXM_n01_R23rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R24_2 HVHMMBGXM_n01_R24_2.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_R24rc HVHMMBGXM_n01_R24rc.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HVHMMBGXM_n01_undetermined HVHMMBGXM_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 250016235.0 0.0 151.0 97.0 0.18555882399936655 pass fail fail pass pass fail fail pass 151.0 warn pass fail