FastQCFastQC Report
Wed 26 Oct 2022
HVHMMBGXM_n01_T0_R1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVHMMBGXM_n01_T0_R1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9905854
Sequences flagged as poor quality0
Sequence length151
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGGT6181986.240734014452464No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT6086636.144477800702494No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT3601003.635224181579902No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGGT3526863.5603795493048858No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT2060672.080254766524926No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGGT1976221.995002147215172No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGCT1788921.805922033577317No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT1681011.69698644861917No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT1560801.5756339635128884No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGGT1414051.4274892402007944No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGCT1363051.3760045322695045No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGGT1295781.308095193004056No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGCT1206731.2181988549397154No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGGT1148921.1598394242434826No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGCT1061241.0713261067647475No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGGT885160.8935726288717762No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGGT871310.8795909974041612No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGCT865950.8741800555509903No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGCT836500.8444501604808632No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGGT835230.8431680903029664No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGCT793650.8011929107778087No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCT792490.8000218860483912No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGGT778230.7856263579091716No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT760470.7676975655001578No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGCT726920.7338287037139857No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT722630.7294979312232949No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGGT697500.7041290937661709No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGCT687180.693711011690663No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGGT649300.6554709972507166No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGCT624950.6308895729737184No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGCT615330.6211781437521692No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGGT591100.5967178599644211No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCT586130.5917006247013129No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGCT533850.5389237515513554No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGCT524090.5290709917590144No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGGT522780.5277485414180342No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGGT494290.49898777026190777No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGCT493330.49801864634790705No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGGT489960.4946166176081335No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGCT487890.49252694416856946No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGGT475600.48012013906120565No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGCT469080.4735381724786171No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT463720.4681272306254463No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGGT459500.46386712342015135No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGCT451070.4553570040503323No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGGT437800.441960884947426No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGCT425180.4292209434946245No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGGT424600.42863543112991564No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGCT420950.4249507412485587No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGGT413440.417369365629657No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGGT400390.4041953374237093No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT384240.38789184657880077No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGGT383560.3872053838063836No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGCT381550.3851762806114445No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT375690.37926058671973156No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGCT366860.3703466657190788No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGCT365880.36935735172353645No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGGT347250.3505502907674593No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGGT345350.34863223302099955No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGCT342620.3458762868905599No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGGT330830.33397423382173813No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGGT330580.3337218578024671No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGCT330000.33313634543775833No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGGT327870.33098610175356913No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGGT324760.32784654407383756No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGCT324130.32721055650527453No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGCT322770.32583763096044016No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGGT318950.32198132538597884No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGCT315260.31825625534153845No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGGT313900.3168833297967041No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGGT304760.30765646253215523No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGGT297680.3005091736663997No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCT277060.27969319959692523No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCT253900.2563130851716571No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGGT249280.25164917633552847No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGGT247490.2498421640375479No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCCCTACCAACTGGT232270.23447751198432767No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGGT231520.23372038392651456No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT230250.23243831374861776No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCCCTACCAACTGGT229570.23175185097620055No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGCT214400.21643767412683448No Hit
TAATTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT185500.18726300629910356No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCCCTACCAACTGGT184390.18614245677354016No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCCCTACCAACTGCT182020.1837499321108508No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCCCTACCAACTGCT175940.1776121473221794No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCA173860.17551237884184445No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCCATACCAACTGGT153970.15543334274864137No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCCCTACCAACTGGT144360.145732008567863No Hit
TAAGTACAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT144330.1457017234455505No Hit
TAAGTATAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT142520.14387452106602824No Hit
TAAGTAGACTCTTCAGCAAAGGACGAAACACCGAACCAATACCAACTGCT139030.14035135183700467No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCTAACCAATACCAACTGCT134610.1358893438162929No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCTAACCAATACCAACTGCT133480.1347486042091878No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCCCTACCAACTGCT129770.13100334408320574No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCACTACCAACTGCT127780.12899443096980834No Hit
TAAGTAGAGTCTTCAGCAAAGGACGAAACACCGAACCAATACCAACTGCT126860.12806568721889097No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCA124760.12594572865701434No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCA120280.12142315039167749No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCA120100.12124143965780235No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGCT114410.11549736145919373No Hit
TAAGTAGAGTCTTGTGCAAAGGACGAAACACCGAACCACTACCAACTGCT113450.11452823754519298No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGGT110060.11110601872387782No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGGT107690.10871349406118846No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCA106320.10733047347558324No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGCT104230.10522060995447743No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCTAACCAATACCAACTGCT102050.10301989106643406No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT100980.10193972170395404No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)