FastQCFastQC Report
Wed 2 Nov 2022
HVHMMBGXM_n01_R13_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVHMMBGXM_n01_R13_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9821991
Sequences flagged as poor quality0
Sequence length151
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGGT6134156.245322358776342No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT6041136.15061650942258No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT3573363.638121843117144No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGGT3499323.562739978075728No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT2045282.082347662505494No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGGT1960931.996468944025707No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGCT1775311.8074848571944322No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT1668461.6986983596299365No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT1548851.5769206060156236No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGGT1402611.4280302232001638No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGCT1352541.3770527788103246No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGGT1285101.3083905289670903No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGCT1197321.219019646831279No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGGT1139571.1602230138471925No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGCT1053061.0721451485752738No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGGT878060.8939735334719814No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGGT864140.8798012541449081No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGCT859510.8750873422710325No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGCT829730.8447676239980264No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGGT828580.843596781955919No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGCT787140.8014057434994596No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCT785980.8002247202222035No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGGT772020.7860117159545351No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT754770.7684490853229249No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCAATACCAACTGCT721430.7345048473369604No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT716980.7299741976957625No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGGT692040.7045821972347561No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGCT681860.6942176998533189No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGGT644460.6561398803969583No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCACTACCAACTGCT619760.6309922295795222No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCACTACCAACTGCT610470.6215338621263244No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGGT586290.5969156355366239No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCT581230.5917639305513516No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGCT529850.539452744357025No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGCT519450.5288642598023151No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGGT518710.5281108484013068No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGGT490270.4991554156382347No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCACTACCAACTGCT489180.49804566100701986No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGGT486240.49505237787328454No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGCT483860.4926292439078798No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGGT471800.4803506743184758No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGCT465230.47366160282574077No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCT459690.4680211985533279No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGGT456210.46447812872155964No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGCT447740.4558546225505603No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGGT434070.44193687410220595No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCAATACCAACTGCT421820.4294648610449755No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGGT421180.4288132619954549No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCAATACCAACTGCT417630.4251989235176452No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCACTACCAACTGGT410490.4179295216214309No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGGT397060.40425612281664686No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT381310.38822067745735056No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGGT380260.3871516477667308No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGCT378280.3851357632072764No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT372830.37958699005120244No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGCT364110.3707089530014841No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGCT363020.36959919837026933No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCACTACCAACTGGT344430.3506722822287253No Hit
TAAGTAGACTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGGT342700.3489109285479899No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGCT339630.3457852893573207No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGGT328390.33434158105011497No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGGT327880.33382233805752826No Hit
TAAGTAGAGTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGCT327450.3333845449461316No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGGT325090.33098177345102436No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGGT322210.32804957772818155No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGCT321400.32722489768113205No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGCT320210.32601333069842964No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCACTACCAACTGGT316480.32221572998794235No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCAATACCAACTGCT312790.3184588542180501No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGGT311460.3171047499432651No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCACTACCAACTGGT302380.3078601884281914No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGGT295250.3006009677671258No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCT274640.27961744212553236No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCT251670.2562311449888317No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGGT247320.25180230769912126No Hit
TAAGTAGACTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGGT245420.24986787302085697No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCCCTACCAACTGGT230430.2346062015328664No Hit
TAAGTAGAGTCTTGACGAAAGGACGAAACACCGAACCAATACCAACTGGT229670.23383242766156068No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGGT228610.23275321673579216No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCCCTACCAACTGGT227940.23207107398082524No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGCT212520.21637160938143804No Hit
TAATTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT183910.18724309562083696No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCGAACCCCTACCAACTGGT182960.18627587828170478No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCCCTACCAACTGCT180730.18400546284353142No Hit
TAAGTAGAGTCTTGTCGAAAGGACGAAACACCGAACCCCTACCAACTGCT174460.17762182840525917No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCA172430.175555037670061No Hit
TAAGTAGAGTCTTCTGGAAAGGACGAAACACCGAACCCATACCAACTGGT152630.15539619207551705No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCCCTACCAACTGGT143150.145744381154493No Hit
TAAGTACAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT143090.14568329374360045No Hit
TAAGTATAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT141410.14397284623860884No Hit
TAAGTAGACTCTTCAGCAAAGGACGAAACACCGAACCAATACCAACTGCT137850.14034832652565046No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCTAACCAATACCAACTGCT133300.13571586453296486No Hit
TAAGTAGAGTCTTCACGAAAGGACGAAACACCTAACCAATACCAACTGCT132430.13483009707502278No Hit
TAAGTAGAGTCTTCTCGAAAGGACGAAACACCGAACCCCTACCAACTGCT128850.13118521489176688No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCACTACCAACTGCT126610.1289046182184447No Hit
TAAGTAGAGTCTTCAGCAAAGGACGAAACACCGAACCAATACCAACTGCT125680.12795776334961007No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCA123730.12597242249560195No Hit
TAAGTAGACTCTTCACGAAAGGACGAAACACCGAACCAATACCAACTGCA119310.12147231655985023No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGCA118990.12114651703508993No Hit
TAAGTAGACTCTTGAGGAAAGGACGAAACACCGAACCCCTACCAACTGCT113590.11564865005475977No Hit
TAAGTAGAGTCTTGTGCAAAGGACGAAACACCGAACCACTACCAACTGCT112560.11459998283443755No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGGT109100.11107727547296674No Hit
TAAGTAGAGTCTTCACCAAAGGACGAAACACCGAACCAATACCAACTGGT106800.10873559138875202No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCAATACCAACTGCA105460.10737130587881827No Hit
TAAGTAGACTCTTGTGGAAAGGACGAAACACCGAACCCATACCAACTGCT103470.1053452400842151No Hit
TAAGTAGACTCTTCACCAAAGGACGAAACACCTAACCAATACCAACTGCT101300.10313591205693429No Hit
TAAGTAGACTCTTCTGGAAAGGACGAAACACCGAACCCCTACCAACTGCT100260.10207706360146329No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)