FastQCFastQC Report
Wed 2 Nov 2022
HVHMMBGXM_n01_R04rc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVHMMBGXM_n01_R04rc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAACTGCT222.22222222222222No Hit
TAAGTAGACTCTTGAGCAAAGGACGAAACACCGAACCAATACCAACTGGT111.11111111111111No Hit
TAAGTAGACTCTTGTCGAAAGGACGAAACACCTAACCCATACCAACTGCT111.11111111111111No Hit
TAAGTAGACTCTTCTCGAAAGGACGAAACACCGAACCAATACCAACTGCT111.11111111111111No Hit
TAAGTATAGTCTTGTGGAAAGGACGAAACACCTAACCACTACCAACTGGT111.11111111111111No Hit
TAAGTAGAGTCTACAGGAAAGGACGAAACACCGAACCAATACCAACTGGT111.11111111111111No Hit
TAAGTAGAGTCTTGTGGAAAGGACGAAACACCGAACCACTACCAAGTGGT111.11111111111111No Hit
TAAGTAGAGTCTTCAGGAAAGGACGAAACACCGAACCCCAAACAGGTCGA111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)