FastQCFastQC Report
Fri 25 Feb 2022
HVGTVDRXY_n02_WT3_N_8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVGTVDRXY_n02_WT3_N_8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12536256
Sequences flagged as poor quality0
Sequence length101
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG627330.5004125633682018No Hit
TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT178100.1420679347964815No Hit
TTTTTTTTTGAATAACGAATCTTTATTAAAATATACTTAGTTACAAACAA176410.14071984490425213No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)