FastQCFastQC Report
Fri 25 Feb 2022
HVGTVDRXY_n02_WT3_C_48.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVGTVDRXY_n02_WT3_C_48.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41605830
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1311700.31526831696423313No Hit
TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT528000.12690529187856606No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)