FastQCFastQC Report
Fri 25 Feb 2022
HVGTVDRXY_n02_WT2_N_11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVGTVDRXY_n02_WT2_N_11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences727115
Sequences flagged as poor quality0
Sequence length101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28730.3951231923423393No Hit
TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9340.12845285821362507No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)