FastQCFastQC Report
Fri 26 Jan 2024
HVF32AFX5_n01_DAM-GR-NLP7-2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVF32AFX5_n01_DAM-GR-NLP7-2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21729492
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCAGTCAATCTCGTAT1143320.526160482720903TruSeq Adapter, Index 18 (97% over 38bp)
TCCTCGGCCGCGACCACGCTGCCCTATAGTGAGTCGTATTAGAGATCGGA246720.11354154068581078Clontech Universal Primer Mix Long (100% over 23bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)