HVCHNBGX7_n02_MT_30904.TR4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVCHNBGX7_n02_MT_30904.TR4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14016551
Sequences flagged as poor quality	0
Sequence length	151
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	38588	0.27530310416592496	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	28802	0.20548564336547556	No Hit
CCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTC	24582	0.17537837946011112	No Hit
CCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCC	19395	0.13837212877832783	No Hit
CCGGGGCCGAGGGAGCGAGACCCGTCGCCGCGCTCTCCCCCCTCCCGGCG	17096	0.12197009093035797	No Hit
CCGCTACGGACCTCCACCAGAGTTTCCTCTGGCTTCGCCCTGCCCAGGCA	15676	0.11183921065888462	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	14823	0.10575354807327424	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTCTTG	6570	47.13223	145
TGTGTAT	3540	43.429825	145
AACGTAT	24390	33.03822	6
GAGTCTA	4920	33.01187	2
CCGTATA	2605	32.571186	145
GAACGTA	25955	31.128736	5
GATCCTG	4490	30.852074	5
CGTATTC	26425	30.7717	8
TTCGCCG	13055	30.441015	145
TCGTGTT	7510	30.127987	145
CGGGAAC	26385	30.036568	2
AAGAGTT	9200	29.95375	145
ACGTATT	27920	29.279678	7
GTATTCA	28385	28.62155	9
TTACTTC	5405	27.907839	4
GGAACGT	28550	27.585592	4
GAAACTA	10655	26.680328	4
TACTTCC	5625	26.431915	5
TGGATGC	5670	25.960848	3
TCGATCT	2090	25.326923	3