HVCHNBGX7_n02_MT_30783.TR3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVCHNBGX7_n02_MT_30783.TR3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11093977
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCC	45818	0.4129988731723529	No Hit
CGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCCG	33438	0.30140679036922463	No Hit
CTGGGTTAGAACCTCAAAGACACCAGGGTGGTATTTCAAGGACGGCTCCA	19529	0.17603245436690557	No Hit
CCCCAGTCAAACTACCCACCAGACACTGTCCGAGACCACGTTTCGTAATC	14682	0.13234208075246595	No Hit
CTCACGAGCAATTAGTATGGGTTAGCTTCACGCGTTACCGCGCTTCCACA	14108	0.12716810211522883	No Hit
GCCCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATT	13037	0.1175142151457498	No Hit
CGGCGAGCGAACGCGAAGGAGCCTGTTAGTGATAATGACAGAGACAGAGG	11641	0.10493081065518706	No Hit
GCTACACACGTGCTACAATGGCGTATACAGAGGGAAGCGATAGTGCGAGC	11276	0.1016407371315084	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGGGAA	23245	40.365314	1
GAGCAAT	7830	34.830128	6
GGTTAGA	9395	34.425705	4
AACGTAT	30120	33.568874	6
GCAATTA	9240	33.363937	8
ACGAGCA	7795	32.933044	4
GGGAACG	30340	32.289043	3
TCACGAG	7865	31.899	2
TGTCCTA	5100	31.1438	5
ACGTATT	33320	30.695621	7
CAATTAG	10150	30.515755	9
AGCAATT	9385	30.45259	7
GAACGTA	34695	29.892813	5
GGAACGT	33790	29.40202	4
GTATTCA	34650	29.203392	9
CGAGCAA	9670	28.350647	5
CCATTGT	22295	28.264761	145
CGTATTC	39435	25.67816	8
CGGGAAC	38950	24.610685	2
TATTCAC	31975	24.250988	9