HVCHNBGX7_n02_MT_30783.TR3_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVCHNBGX7_n02_MT_30783.TR3_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11093977
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCC	45818	0.4129988731723529	No Hit
CGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCCG	33438	0.30140679036922463	No Hit
CTGGGTTAGAACCTCAAAGACACCAGGGTGGTATTTCAAGGACGGCTCCA	19529	0.17603245436690557	No Hit
CCCCAGTCAAACTACCCACCAGACACTGTCCGAGACCACGTTTCGTAATC	14682	0.13234208075246595	No Hit
CTCACGAGCAATTAGTATGGGTTAGCTTCACGCGTTACCGCGCTTCCACA	14108	0.12716810211522883	No Hit
GCCCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATT	13037	0.1175142151457498	No Hit
CGGCGAGCGAACGCGAAGGAGCCTGTTAGTGATAATGACAGAGACAGAGG	11641	0.10493081065518706	No Hit
GCTACACACGTGCTACAATGGCGTATACAGAGGGAAGCGATAGTGCGAGC	11276	0.1016407371315084	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGGGAA	23190	40.336124	1
GGTTAGA	9345	34.687153	4
GAGCAAT	7900	34.61282	6
AACGTAT	30095	33.52397	6
GCAATTA	9270	33.41213	8
ACGAGCA	7775	33.017433	4
GGGAACG	30350	32.158478	3
TCACGAG	7850	31.959349	2
TGTCCTA	5060	31.246351	5
ACGTATT	33285	30.640423	7
CAATTAG	10180	30.56803	9
AGCAATT	9380	30.54585	7
GAACGTA	34680	29.842707	5
GGAACGT	33815	29.315653	4
GTATTCA	34625	29.140388	9
CGAGCAA	9735	28.23557	5
CCATTGT	22360	27.955677	145
CGTATTC	39445	25.59784	8
CGGGAAC	38965	24.526308	2
TATTCAC	31995	24.371616	9