HVCHNBGX7_n01_MT_30904.TR4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVCHNBGX7_n01_MT_30904.TR4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14016551
Sequences flagged as poor quality	0
Sequence length	151
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGTCT	38774	0.27663010679303346	No Hit
CCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTC	26955	0.19230836458983383	No Hit
GTGGGATCCCGAGGCCTCTCCAGTCCGCCGAGGGCGCACCACCGGCCCGT	26399	0.18834162555396117	No Hit
CCGGGAACGTATTCACCGCAACATTCTGATTTGCGATTACTAGCGATTCC	19355	0.13808675186927227	No Hit
CCGGGGCCGAGGGAGCGAGACCCGTCGCCGCGCTCTCCCCCCTCCCGGCG	17303	0.12344691643472064	No Hit
CCGCTACGGACCTCCACCAGAGTTTCCTCTGGCTTCGCCCTGCCCAGGCA	17121	0.12214845149851772	No Hit
TGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGT	17037	0.121549159989501	No Hit
GTCGGAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAG	14021	0.10003174104670971	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCACA	4560	39.423256	145
GAGTCTA	4850	36.018616	2
AACGTAT	24035	33.11387	6
TGCCGTG	8390	31.448874	145
AAATCTG	5445	31.018705	145
GATCCTG	4210	30.991354	5
GAACGTA	25800	30.932695	5
CGAAATG	14225	30.880617	145
TCGATCT	2305	30.81795	3
GAAACTA	11065	29.740932	4
CGGGAAC	26380	29.648203	2
ACGTATT	27730	28.805824	7
GTATTCA	27970	28.791687	9
TACTTCC	5535	28.679834	5
CGTATGG	4205	28.443537	145
CGTATTC	28355	28.349833	8
TTACTTC	5380	28.293531	4
GGAACGT	28195	27.559597	4
TCTAACA	6555	26.649834	5
AAGAAAC	12295	26.529902	2