FastQCFastQC Report
Fri 8 Apr 2022
HVCF2DRXY_l02_n01_RS110_re.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVCF2DRXY_l02_n01_RS110_re.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8199198
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC808390.9859378929500179No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC384230.4686190039562406No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT222100.27088015193681136No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA210550.25679340833091235No Hit
TTATCCTATACGACACACCCAGTCTTGTAAAGCTGGGACCCACATCACAC178420.21760664884541148No Hit
TTGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC166950.20361747575799488No Hit
TGGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC155850.19007956631855946No Hit
GGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC138820.16930924219661483No Hit
AGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC112930.13773298315274252No Hit
TATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTATC97660.11910921043741106No Hit
CGGGGTTAAAATAATTTCTAGCTAATGTATATATATATTGATGATATATG95630.11663335853091972No Hit
TGATGGTATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC91480.11157188788464432No Hit
GTCTTGTAAAGCTGGGACCCACATCACACATCAGGAAGTTGAAACCAATG91140.11115721318109406No Hit
GTGTTGTAAAGTACAGAGAAGTTATTGAAGACCCCTCGGGGTTAAAATAA87070.10619331305330107No Hit
TTATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC84220.10271736333236495No Hit
TGAGGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC82840.10103427188854325No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)