[2022-04-08 11:25:21,045] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2022-04-08 11:25:21,045] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2022-04-08 11:25:21,045] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2022-04-08 11:25:21,046] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2022-04-08 11:25:21,046] multiqc [DEBUG ] New config 'report_section_order': {'demux_report': {'after': 'run_stats'}} [2022-04-08 11:25:21,047] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HVCF2DRXY/1 [2022-04-08 11:25:21,444] multiqc [WARNING] MultiQC Version v1.12 now available! [2022-04-08 11:25:21,444] multiqc [INFO ] This is MultiQC v1.9 [2022-04-08 11:25:21,444] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HVCF2DRXY/1 [2022-04-08 11:25:21,444] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HVCF2DRXY/1 [2022-04-08 11:25:21,444] multiqc [INFO ] Template : default [2022-04-08 11:25:21,444] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2022-04-08 11:25:21,444] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HVCF2DRXY/1 [2022-04-08 11:25:21,444] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2022-04-08 11:25:21,444] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-17452572/tmpm54i3vw1 [2022-04-08 11:25:21,565] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW137_fastqc.html [2022-04-08 11:25:21,568] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern 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HVCF2DRXY_l01_n01_WW91_fastqc.html [2022-04-08 11:25:24,539] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW91_fastqc.html [2022-04-08 11:25:24,601] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW119_fastqc.html [2022-04-08 11:25:24,603] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW119_fastqc.html [2022-04-08 11:25:24,648] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW123_fastqc.html [2022-04-08 11:25:24,650] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW123_fastqc.html [2022-04-08 11:25:24,695] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW157_fastqc.html [2022-04-08 11:25:24,697] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW157_fastqc.html [2022-04-08 11:25:24,742] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW107_fastqc.html [2022-04-08 11:25:24,743] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW107_fastqc.html [2022-04-08 11:25:24,804] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW53_fastqc.html [2022-04-08 11:25:24,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW53_fastqc.html [2022-04-08 11:25:24,850] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW129_fastqc.html [2022-04-08 11:25:24,852] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW129_fastqc.html [2022-04-08 11:25:24,897] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW74_fastqc.html [2022-04-08 11:25:24,899] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW74_fastqc.html [2022-04-08 11:25:24,945] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW153_fastqc.html [2022-04-08 11:25:24,947] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW153_fastqc.html [2022-04-08 11:25:24,991] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW95_fastqc.html [2022-04-08 11:25:24,993] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW95_fastqc.html [2022-04-08 11:25:25,053] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW128_fastqc.html [2022-04-08 11:25:25,055] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW128_fastqc.html [2022-04-08 11:25:25,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW65_fastqc.html [2022-04-08 11:25:25,102] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW65_fastqc.html [2022-04-08 11:25:25,147] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW122_fastqc.html [2022-04-08 11:25:25,149] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW122_fastqc.html [2022-04-08 11:25:25,196] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW161_fastqc.html [2022-04-08 11:25:25,198] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW161_fastqc.html [2022-04-08 11:25:25,243] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW68_fastqc.html [2022-04-08 11:25:25,245] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW68_fastqc.html [2022-04-08 11:25:25,291] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW125_fastqc.html [2022-04-08 11:25:25,293] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW125_fastqc.html [2022-04-08 11:25:25,354] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW88_fastqc.html [2022-04-08 11:25:25,356] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW88_fastqc.html [2022-04-08 11:25:25,402] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW108_fastqc.html [2022-04-08 11:25:25,404] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW108_fastqc.html [2022-04-08 11:25:25,451] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW111_fastqc.html [2022-04-08 11:25:25,452] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW111_fastqc.html [2022-04-08 11:25:25,499] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW103_fastqc.html [2022-04-08 11:25:25,501] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW103_fastqc.html [2022-04-08 11:25:25,546] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW130_fastqc.html [2022-04-08 11:25:25,547] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW130_fastqc.html [2022-04-08 11:25:25,593] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW135_fastqc.html [2022-04-08 11:25:25,595] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW135_fastqc.html [2022-04-08 11:25:25,641] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW51_fastqc.html [2022-04-08 11:25:25,643] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW51_fastqc.html [2022-04-08 11:25:25,688] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW114_fastqc.html [2022-04-08 11:25:25,689] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW114_fastqc.html [2022-04-08 11:25:25,735] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW144_fastqc.html [2022-04-08 11:25:25,736] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW144_fastqc.html [2022-04-08 11:25:25,782] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW169_fastqc.html [2022-04-08 11:25:25,783] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW169_fastqc.html [2022-04-08 11:25:25,828] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW116_fastqc.html [2022-04-08 11:25:25,830] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW116_fastqc.html [2022-04-08 11:25:25,876] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW148_fastqc.html [2022-04-08 11:25:25,877] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW148_fastqc.html [2022-04-08 11:25:25,922] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW57_fastqc.html [2022-04-08 11:25:25,924] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW57_fastqc.html [2022-04-08 11:25:25,970] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW72_fastqc.html [2022-04-08 11:25:25,972] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW72_fastqc.html [2022-04-08 11:25:26,031] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW163_fastqc.html [2022-04-08 11:25:26,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW163_fastqc.html [2022-04-08 11:25:26,078] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW90_fastqc.html [2022-04-08 11:25:26,079] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW90_fastqc.html [2022-04-08 11:25:26,143] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW146_fastqc.html [2022-04-08 11:25:26,145] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW146_fastqc.html [2022-04-08 11:25:26,190] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW126_fastqc.html [2022-04-08 11:25:26,191] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW126_fastqc.html [2022-04-08 11:25:26,236] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW158_fastqc.html [2022-04-08 11:25:26,238] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW158_fastqc.html [2022-04-08 11:25:26,283] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW62_fastqc.html [2022-04-08 11:25:26,284] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW62_fastqc.html [2022-04-08 11:25:26,329] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW165_fastqc.html [2022-04-08 11:25:26,331] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HVCF2DRXY_l01_n01_WW165_fastqc.html [2022-04-08 11:25:26,691] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2022-04-08 11:25:26,692] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2022-04-08 11:25:26,700] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2022-04-08 11:25:26,744] multiqc.modules.custom_content.custom_content [INFO ] demux_report-1: Found 97 samples (table) [2022-04-08 11:25:26,753] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2022-04-08 11:25:26,758] multiqc [DEBUG ] No samples found: conpair [2022-04-08 11:25:26,762] multiqc [DEBUG ] No samples found: peddy [2022-04-08 11:25:26,767] multiqc [DEBUG ] No samples found: somalier [2022-04-08 11:25:26,771] multiqc [DEBUG ] No samples found: methylQA [2022-04-08 11:25:26,778] multiqc [DEBUG ] No samples found: mosdepth [2022-04-08 11:25:26,782] multiqc [DEBUG ] No samples found: phantompeakqualtools [2022-04-08 11:25:26,785] multiqc [DEBUG ] No samples found: qualimap [2022-04-08 11:25:26,790] multiqc [DEBUG ] No samples found: preseq [2022-04-08 11:25:26,794] multiqc [DEBUG ] No samples found: quast [2022-04-08 11:25:26,798] multiqc [DEBUG ] No samples found: qorts [2022-04-08 11:25:26,803] multiqc [DEBUG ] No samples found: rna_seqc [2022-04-08 11:25:26,807] multiqc [DEBUG ] No samples found: rockhopper [2022-04-08 11:25:26,811] multiqc [DEBUG ] No samples found: rsem [2022-04-08 11:25:26,821] multiqc [DEBUG ] No samples found: rseqc [2022-04-08 11:25:26,825] multiqc [DEBUG ] No samples found: busco [2022-04-08 11:25:26,829] multiqc [DEBUG ] No samples found: goleft_indexcov [2022-04-08 11:25:26,833] multiqc [DEBUG ] No samples found: disambiguate [2022-04-08 11:25:26,837] multiqc [DEBUG ] No samples found: supernova [2022-04-08 11:25:26,849] multiqc [DEBUG ] No samples found: deeptools [2022-04-08 11:25:26,853] multiqc [DEBUG ] No samples found: sargasso [2022-04-08 11:25:26,857] multiqc [DEBUG ] No samples found: verifybamid [2022-04-08 11:25:26,861] multiqc [DEBUG ] No samples found: mirtrace [2022-04-08 11:25:26,865] multiqc [DEBUG ] No samples found: happy [2022-04-08 11:25:26,870] multiqc [DEBUG ] No samples found: mirtop [2022-04-08 11:25:26,875] multiqc [DEBUG ] No samples found: homer [2022-04-08 11:25:26,879] multiqc [DEBUG ] No samples found: macs2 [2022-04-08 11:25:26,883] multiqc [DEBUG ] No samples found: theta2 [2022-04-08 11:25:26,888] multiqc [DEBUG ] No samples found: snpeff [2022-04-08 11:25:26,894] multiqc [DEBUG ] No samples found: gatk [2022-04-08 11:25:26,898] multiqc [DEBUG ] No samples found: htseq [2022-04-08 11:25:26,902] multiqc [DEBUG ] No samples found: bcftools [2022-04-08 11:25:26,907] multiqc [DEBUG ] No samples found: featureCounts [2022-04-08 11:25:26,912] multiqc [DEBUG ] No samples found: fgbio [2022-04-08 11:25:26,924] multiqc [DEBUG ] No samples found: dragen [2022-04-08 11:25:26,928] multiqc [DEBUG ] No samples found: dedup [2022-04-08 11:25:26,932] multiqc [DEBUG ] No samples found: damageprofiler [2022-04-08 11:25:26,952] multiqc [DEBUG ] No samples found: biobambam2 [2022-04-08 11:25:26,956] multiqc [DEBUG ] No samples found: mtnucratio [2022-04-08 11:25:26,958] multiqc [DEBUG ] No samples found: picard [2022-04-08 11:25:26,962] multiqc [DEBUG ] No samples found: prokka [2022-04-08 11:25:26,966] multiqc [DEBUG ] No samples found: samblaster [2022-04-08 11:25:26,973] multiqc [DEBUG ] No samples found: samtools [2022-04-08 11:25:26,978] multiqc [DEBUG ] No samples found: sexdeterrmine [2022-04-08 11:25:26,982] multiqc [DEBUG ] No samples found: bamtools [2022-04-08 11:25:26,986] multiqc [DEBUG ] No samples found: jellyfish [2022-04-08 11:25:26,993] multiqc [DEBUG ] No samples found: vcftools [2022-04-08 11:25:26,997] multiqc [DEBUG ] No samples found: longranger [2022-04-08 11:25:27,001] multiqc [DEBUG ] No samples found: stacks [2022-04-08 11:25:27,005] multiqc [DEBUG ] No samples found: varscan2 [2022-04-08 11:25:27,017] multiqc [DEBUG ] No samples found: bbmap [2022-04-08 11:25:27,022] multiqc [DEBUG ] No samples found: bismark [2022-04-08 11:25:27,026] multiqc [DEBUG ] No samples found: biscuit [2022-04-08 11:25:27,030] multiqc [DEBUG ] No samples found: hicexplorer [2022-04-08 11:25:27,034] multiqc [DEBUG ] No samples found: hicup [2022-04-08 11:25:27,040] multiqc [DEBUG ] No samples found: hicpro [2022-04-08 11:25:27,044] multiqc [DEBUG ] No samples found: salmon [2022-04-08 11:25:27,048] multiqc [DEBUG ] No samples found: kallisto [2022-04-08 11:25:27,053] multiqc [DEBUG ] No samples found: slamdunk [2022-04-08 11:25:27,057] multiqc [DEBUG ] No samples found: star [2022-04-08 11:25:27,062] multiqc [DEBUG ] No samples found: hisat2 [2022-04-08 11:25:27,066] multiqc [DEBUG ] No samples found: tophat [2022-04-08 11:25:27,070] multiqc [DEBUG ] No samples found: bowtie2 [2022-04-08 11:25:27,074] multiqc [DEBUG ] No samples found: bowtie1 [2022-04-08 11:25:27,078] multiqc [DEBUG ] No samples found: snpsplit [2022-04-08 11:25:27,082] multiqc [DEBUG ] No samples found: kat [2022-04-08 11:25:27,087] multiqc [DEBUG ] No samples found: leehom [2022-04-08 11:25:27,091] multiqc [DEBUG ] No samples found: adapterRemoval [2022-04-08 11:25:27,095] multiqc [DEBUG ] No samples found: clipandmerge [2022-04-08 11:25:27,099] multiqc [DEBUG ] No samples found: cutadapt [2022-04-08 11:25:27,103] multiqc [DEBUG ] No samples found: flexbar [2022-04-08 11:25:27,107] multiqc [DEBUG ] No samples found: kaiju [2022-04-08 11:25:27,111] multiqc [DEBUG ] No samples found: kraken [2022-04-08 11:25:27,115] multiqc [DEBUG ] No samples found: malt [2022-04-08 11:25:27,119] multiqc [DEBUG ] No samples found: trimmomatic [2022-04-08 11:25:27,124] multiqc [DEBUG ] No samples found: sickle [2022-04-08 11:25:27,128] multiqc [DEBUG ] No samples found: skewer [2022-04-08 11:25:27,132] multiqc [DEBUG ] No samples found: sortmerna [2022-04-08 11:25:27,136] multiqc [DEBUG ] No samples found: biobloomtools [2022-04-08 11:25:27,140] multiqc [DEBUG ] No samples found: fastq_screen [2022-04-08 11:25:27,144] multiqc [DEBUG ] No samples found: afterqc [2022-04-08 11:25:27,148] multiqc [DEBUG ] No samples found: fastp [2022-04-08 11:25:34,068] multiqc.modules.fastqc.fastqc [INFO ] Found 97 reports [2022-04-08 11:25:35,304] multiqc [DEBUG ] No samples found: pycoqc [2022-04-08 11:25:35,309] multiqc [DEBUG ] No samples found: minionqc [2022-04-08 11:25:35,313] multiqc [DEBUG ] No samples found: multivcfanalyzer [2022-04-08 11:25:35,318] multiqc [DEBUG ] No samples found: clusterflow [2022-04-08 11:25:35,322] multiqc [DEBUG ] No samples found: bcl2fastq [2022-04-08 11:25:35,327] multiqc [DEBUG ] No samples found: interop [2022-04-08 11:25:35,331] multiqc [DEBUG ] No samples found: ivar [2022-04-08 11:25:35,336] multiqc [DEBUG ] No samples found: flash [2022-04-08 11:25:35,340] multiqc [DEBUG ] No samples found: seqyclean [2022-04-08 11:25:35,340] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found. [2022-04-08 11:25:35,340] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Lane Statistics'. [2022-04-08 11:25:35,340] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Lane 1 Demultiplexing Report'. [2022-04-08 11:25:35,340] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2022-04-08 11:25:35,340] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2022-04-08 11:25:35,451] multiqc [INFO ] Compressing plot data [2022-04-08 11:25:37,151] multiqc [INFO ] Report : multiqc_report.html [2022-04-08 11:25:37,152] multiqc [INFO ] Data : multiqc_data [2022-04-08 11:25:37,152] multiqc [DEBUG ] Moving data file from '/state/partition1/job-17452572/tmpm54i3vw1/multiqc_data' to '/scratch/gencore/logs/html/HVCF2DRXY/1/multiqc_data' [2022-04-08 11:25:37,275] multiqc [INFO ] MultiQC complete