FastQCFastQC Report
Fri 8 Apr 2022
HVCF2DRXY_l01_n01_WW65.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVCF2DRXY_l01_n01_WW65.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9015473
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGG154860.17177135353852205No Hit
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC99290.11013287932868303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)