HVC57BGX7_n01_3_biotin_TGA4_R1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVC57BGX7_n01_3_biotin_TGA4_R1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9907216
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGC	204492	2.064071278954653	TruSeq Adapter, Index 3 (100% over 50bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATG	15606	0.15752154793031664	TruSeq Adapter, Index 3 (100% over 49bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	28210	60.267536	44
TATGCCG	28425	59.934196	46
GTATGCC	28745	59.58383	45
GCCGTCT	27185	59.57837	49
ATGCCGT	28375	59.275127	47
CTCGTAT	27175	58.596092	42
TGCCGTC	28755	58.138855	48
TCGTATG	28370	57.990616	43
TCTCGTA	27175	57.269917	41
CCGTCTT	28610	57.234463	50
CATCTCG	27920	56.01838	39
ATCTCGT	28135	55.117336	40
GCATCTC	28620	54.929504	38
TAGGCAT	31975	54.550285	35
GGCATCT	29275	54.12138	37
CTGCTTG	29025	53.65473	57
TTAGGCA	33680	53.644684	34
AGGCATC	31435	52.688145	36
GCTTGAA	31140	52.247242	59
TGCTTGA	30405	52.20935	58