HVC57BGX7_n01_1_biotin_ASR3_R1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVC57BGX7_n01_1_biotin_ASR3_R1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5982027
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC	155777	2.6040838665556008	TruSeq Adapter, Index 1 (100% over 50bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG	11103	0.18560598272124149	TruSeq Adapter, Index 1 (100% over 49bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	22835	57.303333	46
GCCGTCT	22745	57.037712	49
ATGCCGT	23045	56.796333	47
CGTATGC	23140	56.729523	44
GTATGCC	23110	56.651733	45
TGCCGTC	23090	56.625015	48
CTCGTAT	22135	56.07941	42
CCGTCTT	23245	55.945854	50
TCTCGTA	21645	55.748276	41
CTGCTTG	23235	55.502556	57
TCGTATG	23655	55.094536	43
ATCTCGT	21865	53.939365	40
CACGATC	22010	53.781116	36
TGCTTGA	24085	53.630955	58
ACGATCT	21990	53.477627	37
CGATCTC	22085	53.40294	38
TCACGAT	23205	53.2199	35
GATCTCG	22275	52.93127	39
GCTTGAA	24600	52.864727	59
CTTCTGC	24495	52.79042	54