HV33TBGXG_n01_AKM158.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HV33TBGXG_n01_AKM158.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15446318
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC	1538351	9.959337882335454	TruSeq Adapter, Index 1 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	28150	0.1822440791391191	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC	21943	0.14205974524155207	TruSeq Adapter, Index 1 (98% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	174005	68.04171	44
TATGCCG	174020	68.013855	46
GTATGCC	174110	67.98457	45
ATGCCGT	174560	67.73838	47
TCGTATG	174975	67.71008	43
CTCGTAT	171620	67.63017	42
CACGATC	166365	67.62534	36
TGCCGTC	175210	67.453964	48
GATCTCG	169295	67.43933	39
ACGATCT	167570	67.409546	37
CGATCTC	168715	67.290504	38
GCCGTCT	175450	67.28831	49
TCACGAT	170120	67.23243	35
ACGTCTG	179435	67.182396	15
ACACGTC	179995	67.12673	13
CTGCTTG	175485	67.06694	57
CATCACG	172940	67.046844	33
CAGTCAC	178530	67.02832	27
TCCAGTC	177960	67.021454	25
CCGTCTT	176085	66.993965	50